Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TraipQ8VIG6 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.62□□□□□ -0.23
TraipQ8VIG6 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
TraipQ8VIG6 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TraipQ8VIG6 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
TraipQ8VIG6 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TraipQ8VIG6 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.62□□□□□ -0.23
TraipQ8VIG6 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TraipQ8VIG6 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TraipQ8VIG6 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TraipQ8VIG6 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TraipQ8VIG6 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TraipQ8VIG6 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
TraipQ8VIG6 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
TraipQ8VIG6 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
TraipQ8VIG6 Gm13665-201ENSMUST00000120830 528 ntBASIC13.62□□□□□ -0.23
TraipQ8VIG6 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TraipQ8VIG6 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TraipQ8VIG6 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.62□□□□□ -0.23
TraipQ8VIG6 AA914427-201ENSMUST00000193194 1166 ntBASIC13.62□□□□□ -0.23
TraipQ8VIG6 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.62□□□□□ -0.23
TraipQ8VIG6 Gm18041-201ENSMUST00000218210 618 ntBASIC13.62□□□□□ -0.23
TraipQ8VIG6 AC159747.1-201ENSMUST00000219903 265 ntBASIC13.62□□□□□ -0.23
TraipQ8VIG6 AC154634.3-201ENSMUST00000224589 736 ntBASIC13.62□□□□□ -0.23
TraipQ8VIG6 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.62□□□□□ -0.23
TraipQ8VIG6 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TraipQ8VIG6 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TraipQ8VIG6 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.62□□□□□ -0.23
TraipQ8VIG6 Gm5082-203ENSMUST00000221920 1518 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TraipQ8VIG6 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TraipQ8VIG6 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.62□□□□□ -0.23
TraipQ8VIG6 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TraipQ8VIG6 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TraipQ8VIG6 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TraipQ8VIG6 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TraipQ8VIG6 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TraipQ8VIG6 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TraipQ8VIG6 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.62□□□□□ -0.23
TraipQ8VIG6 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TraipQ8VIG6 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TraipQ8VIG6 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TraipQ8VIG6 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TraipQ8VIG6 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
TraipQ8VIG6 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TraipQ8VIG6 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
TraipQ8VIG6 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TraipQ8VIG6 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TraipQ8VIG6 Gm7993-201ENSMUST00000200970 1384 ntBASIC13.61□□□□□ -0.23
TraipQ8VIG6 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TraipQ8VIG6 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TraipQ8VIG6 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TraipQ8VIG6 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TraipQ8VIG6 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TraipQ8VIG6 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.61□□□□□ -0.23
TraipQ8VIG6 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TraipQ8VIG6 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TraipQ8VIG6 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TraipQ8VIG6 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TraipQ8VIG6 Gm4819-201ENSMUST00000182170 1009 ntBASIC13.61□□□□□ -0.23
TraipQ8VIG6 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.61□□□□□ -0.23
TraipQ8VIG6 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TraipQ8VIG6 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC13.61□□□□□ -0.23
TraipQ8VIG6 Gm35638-201ENSMUST00000220724 652 ntBASIC13.61□□□□□ -0.23
TraipQ8VIG6 CT573034.1-201ENSMUST00000222983 313 ntBASIC13.61□□□□□ -0.23
TraipQ8VIG6 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TraipQ8VIG6 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
TraipQ8VIG6 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TraipQ8VIG6 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TraipQ8VIG6 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TraipQ8VIG6 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.61□□□□□ -0.23
TraipQ8VIG6 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TraipQ8VIG6 Olfr282-204ENSMUST00000215320 1573 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TraipQ8VIG6 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TraipQ8VIG6 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TraipQ8VIG6 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC13.61□□□□□ -0.23
TraipQ8VIG6 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
TraipQ8VIG6 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TraipQ8VIG6 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TraipQ8VIG6 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TraipQ8VIG6 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TraipQ8VIG6 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TraipQ8VIG6 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TraipQ8VIG6 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TraipQ8VIG6 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TraipQ8VIG6 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TraipQ8VIG6 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TraipQ8VIG6 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TraipQ8VIG6 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.6□□□□□ -0.23
TraipQ8VIG6 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TraipQ8VIG6 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TraipQ8VIG6 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TraipQ8VIG6 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TraipQ8VIG6 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.6□□□□□ -0.23
TraipQ8VIG6 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TraipQ8VIG6 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TraipQ8VIG6 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
TraipQ8VIG6 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TraipQ8VIG6 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.6□□□□□ -0.23
TraipQ8VIG6 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.6□□□□□ -0.23
TraipQ8VIG6 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms