Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim60Q8VI40 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim60Q8VI40 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim60Q8VI40 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim60Q8VI40 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim60Q8VI40 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim60Q8VI40 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim60Q8VI40 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim60Q8VI40 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim60Q8VI40 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trim60Q8VI40 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.18□□□□□ -0.3
Trim60Q8VI40 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim60Q8VI40 Gm19184-201ENSMUST00000196798 928 ntBASIC13.18□□□□□ -0.3
Trim60Q8VI40 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim60Q8VI40 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.18□□□□□ -0.3
Trim60Q8VI40 Gm5186-201ENSMUST00000218781 920 ntBASIC13.18□□□□□ -0.3
Trim60Q8VI40 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.18□□□□□ -0.3
Trim60Q8VI40 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim60Q8VI40 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim60Q8VI40 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim60Q8VI40 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.18□□□□□ -0.3
Trim60Q8VI40 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim60Q8VI40 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim60Q8VI40 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim60Q8VI40 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim60Q8VI40 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim60Q8VI40 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim60Q8VI40 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trim60Q8VI40 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.18□□□□□ -0.3
Trim60Q8VI40 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim60Q8VI40 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim60Q8VI40 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim60Q8VI40 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim60Q8VI40 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Trim60Q8VI40 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim60Q8VI40 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim60Q8VI40 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Trim60Q8VI40 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim60Q8VI40 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim60Q8VI40 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim60Q8VI40 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim60Q8VI40 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim60Q8VI40 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.17□□□□□ -0.3
Trim60Q8VI40 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trim60Q8VI40 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim60Q8VI40 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim60Q8VI40 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.17□□□□□ -0.3
Trim60Q8VI40 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trim60Q8VI40 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim60Q8VI40 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim60Q8VI40 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim60Q8VI40 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim60Q8VI40 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Trim60Q8VI40 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim60Q8VI40 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim60Q8VI40 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Trim60Q8VI40 Gm12859-201ENSMUST00000117834 427 ntBASIC13.17□□□□□ -0.3
Trim60Q8VI40 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.17□□□□□ -0.3
Trim60Q8VI40 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.17□□□□□ -0.3
Trim60Q8VI40 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.17□□□□□ -0.3
Trim60Q8VI40 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim60Q8VI40 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.17□□□□□ -0.3
Trim60Q8VI40 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim60Q8VI40 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim60Q8VI40 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.17□□□□□ -0.3
Trim60Q8VI40 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.17□□□□□ -0.3
Trim60Q8VI40 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim60Q8VI40 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim60Q8VI40 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trim60Q8VI40 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim60Q8VI40 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trim60Q8VI40 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trim60Q8VI40 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim60Q8VI40 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim60Q8VI40 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim60Q8VI40 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim60Q8VI40 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trim60Q8VI40 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim60Q8VI40 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim60Q8VI40 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim60Q8VI40 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim60Q8VI40 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim60Q8VI40 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim60Q8VI40 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim60Q8VI40 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim60Q8VI40 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trim60Q8VI40 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim60Q8VI40 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trim60Q8VI40 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim60Q8VI40 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim60Q8VI40 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim60Q8VI40 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim60Q8VI40 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim60Q8VI40 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim60Q8VI40 Gm7488-201ENSMUST00000117148 684 ntBASIC13.16□□□□□ -0.3
Trim60Q8VI40 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim60Q8VI40 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim60Q8VI40 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim60Q8VI40 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim60Q8VI40 Gm2495-201ENSMUST00000191160 466 ntBASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms