Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh18Q8VHR0 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.34□□□□□ -0.43
Pcdh18Q8VHR0 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh18Q8VHR0 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh18Q8VHR0 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh18Q8VHR0 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh18Q8VHR0 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh18Q8VHR0 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh18Q8VHR0 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh18Q8VHR0 AC153506.1-201ENSMUST00000218768 2915 ntBASIC12.34□□□□□ -0.43
Pcdh18Q8VHR0 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh18Q8VHR0 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh18Q8VHR0 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh18Q8VHR0 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdh18Q8VHR0 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Pcdh18Q8VHR0 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Pcdh18Q8VHR0 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.33□□□□□ -0.43
Pcdh18Q8VHR0 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Pcdh18Q8VHR0 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Pcdh18Q8VHR0 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh18Q8VHR0 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.33□□□□□ -0.44
Pcdh18Q8VHR0 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh18Q8VHR0 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh18Q8VHR0 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.33□□□□□ -0.44
Pcdh18Q8VHR0 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.33□□□□□ -0.44
Pcdh18Q8VHR0 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh18Q8VHR0 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh18Q8VHR0 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh18Q8VHR0 Gm10686-201ENSMUST00000215389 3247 ntBASIC12.33□□□□□ -0.44
Pcdh18Q8VHR0 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh18Q8VHR0 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh18Q8VHR0 Gm12485-201ENSMUST00000119641 291 ntBASIC12.33□□□□□ -0.44
Pcdh18Q8VHR0 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Pcdh18Q8VHR0 Gm21854-201ENSMUST00000179901 471 ntBASIC12.33□□□□□ -0.44
Pcdh18Q8VHR0 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh18Q8VHR0 Gm29667-201ENSMUST00000190817 490 ntBASIC12.33□□□□□ -0.44
Pcdh18Q8VHR0 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.33□□□□□ -0.44
Pcdh18Q8VHR0 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Pcdh18Q8VHR0 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh18Q8VHR0 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh18Q8VHR0 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Pcdh18Q8VHR0 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.33□□□□□ -0.44
Pcdh18Q8VHR0 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh18Q8VHR0 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh18Q8VHR0 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh18Q8VHR0 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh18Q8VHR0 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh18Q8VHR0 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh18Q8VHR0 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh18Q8VHR0 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh18Q8VHR0 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh18Q8VHR0 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.33□□□□□ -0.44
Pcdh18Q8VHR0 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh18Q8VHR0 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh18Q8VHR0 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh18Q8VHR0 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Pcdh18Q8VHR0 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh18Q8VHR0 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh18Q8VHR0 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh18Q8VHR0 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Pcdh18Q8VHR0 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh18Q8VHR0 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh18Q8VHR0 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh18Q8VHR0 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh18Q8VHR0 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh18Q8VHR0 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh18Q8VHR0 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.32□□□□□ -0.44
Pcdh18Q8VHR0 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Pcdh18Q8VHR0 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh18Q8VHR0 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.32□□□□□ -0.44
Pcdh18Q8VHR0 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Pcdh18Q8VHR0 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh18Q8VHR0 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh18Q8VHR0 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh18Q8VHR0 Gm15678-201ENSMUST00000117573 960 ntBASIC12.32□□□□□ -0.44
Pcdh18Q8VHR0 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.32□□□□□ -0.44
Pcdh18Q8VHR0 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh18Q8VHR0 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.32□□□□□ -0.44
Pcdh18Q8VHR0 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh18Q8VHR0 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.32□□□□□ -0.44
Pcdh18Q8VHR0 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Pcdh18Q8VHR0 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh18Q8VHR0 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh18Q8VHR0 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh18Q8VHR0 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh18Q8VHR0 Gm24447-201ENSMUST00000083977 338 ntBASIC12.32□□□□□ -0.44
Pcdh18Q8VHR0 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh18Q8VHR0 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Pcdh18Q8VHR0 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Pcdh18Q8VHR0 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh18Q8VHR0 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh18Q8VHR0 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh18Q8VHR0 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Pcdh18Q8VHR0 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.32□□□□□ -0.44
Pcdh18Q8VHR0 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.32□□□□□ -0.44
Pcdh18Q8VHR0 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh18Q8VHR0 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh18Q8VHR0 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Pcdh18Q8VHR0 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh18Q8VHR0 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms