Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Pck2-205ENSMUST00000226352 2784 ntBASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd2Q8VE28 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nkd2Q8VE28 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkd2Q8VE28 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.65□□□□□ -0.54
Nkd2Q8VE28 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Nkd2Q8VE28 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkd2Q8VE28 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkd2Q8VE28 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.65□□□□□ -0.54
Nkd2Q8VE28 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkd2Q8VE28 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nkd2Q8VE28 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkd2Q8VE28 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkd2Q8VE28 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Nkd2Q8VE28 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC11.65□□□□□ -0.54
Nkd2Q8VE28 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkd2Q8VE28 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.65□□□□□ -0.54
Nkd2Q8VE28 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.65□□□□□ -0.54
Nkd2Q8VE28 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkd2Q8VE28 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Nkd2Q8VE28 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.65□□□□□ -0.54
Nkd2Q8VE28 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nkd2Q8VE28 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.65□□□□□ -0.54
Nkd2Q8VE28 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.65□□□□□ -0.54
Nkd2Q8VE28 Gm37497-201ENSMUST00000195830 798 ntBASIC11.65□□□□□ -0.54
Nkd2Q8VE28 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.65□□□□□ -0.54
Nkd2Q8VE28 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.65□□□□□ -0.54
Nkd2Q8VE28 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.65□□□□□ -0.54
Nkd2Q8VE28 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.65□□□□□ -0.54
Nkd2Q8VE28 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.65□□□□□ -0.54
Nkd2Q8VE28 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkd2Q8VE28 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkd2Q8VE28 Gm10268-201ENSMUST00000085340 555 ntBASIC11.65□□□□□ -0.54
Nkd2Q8VE28 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkd2Q8VE28 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkd2Q8VE28 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkd2Q8VE28 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkd2Q8VE28 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Nkd2Q8VE28 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkd2Q8VE28 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Nkd2Q8VE28 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkd2Q8VE28 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.65□□□□□ -0.55
Nkd2Q8VE28 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Nkd2Q8VE28 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Nkd2Q8VE28 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Nkd2Q8VE28 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Nkd2Q8VE28 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.65□□□□□ -0.55
Nkd2Q8VE28 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Nkd2Q8VE28 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Nkd2Q8VE28 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkd2Q8VE28 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nkd2Q8VE28 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkd2Q8VE28 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nkd2Q8VE28 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nkd2Q8VE28 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.64□□□□□ -0.55
Nkd2Q8VE28 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.64□□□□□ -0.55
Nkd2Q8VE28 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkd2Q8VE28 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Nkd2Q8VE28 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.64□□□□□ -0.55
Nkd2Q8VE28 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.64□□□□□ -0.55
Nkd2Q8VE28 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Nkd2Q8VE28 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Nkd2Q8VE28 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Nkd2Q8VE28 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nkd2Q8VE28 Mir7221-201ENSMUST00000184009 72 ntBASIC11.64□□□□□ -0.55
Nkd2Q8VE28 Gm44364-201ENSMUST00000198368 141 ntBASIC11.64□□□□□ -0.55
Nkd2Q8VE28 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.64□□□□□ -0.55
Nkd2Q8VE28 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nkd2Q8VE28 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Nkd2Q8VE28 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkd2Q8VE28 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkd2Q8VE28 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkd2Q8VE28 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkd2Q8VE28 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Nkd2Q8VE28 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkd2Q8VE28 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkd2Q8VE28 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkd2Q8VE28 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkd2Q8VE28 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Nkd2Q8VE28 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nkd2Q8VE28 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkd2Q8VE28 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.64□□□□□ -0.55
Nkd2Q8VE28 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Nkd2Q8VE28 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms