Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col23a1Q8K4G2 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col23a1Q8K4G2 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col23a1Q8K4G2 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.3■□□□□ 0.04
Col23a1Q8K4G2 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Col23a1Q8K4G2 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col23a1Q8K4G2 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC15.3■□□□□ 0.04
Col23a1Q8K4G2 Gm15352-201ENSMUST00000118696 270 ntBASIC15.3■□□□□ 0.04
Col23a1Q8K4G2 Gm12948-201ENSMUST00000119406 682 ntBASIC15.3■□□□□ 0.04
Col23a1Q8K4G2 Gm12990-201ENSMUST00000120372 468 ntBASIC15.3■□□□□ 0.04
Col23a1Q8K4G2 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col23a1Q8K4G2 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col23a1Q8K4G2 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col23a1Q8K4G2 Gm10729-202ENSMUST00000193403 1375 ntBASIC15.3■□□□□ 0.04
Col23a1Q8K4G2 Gm43186-201ENSMUST00000198130 824 ntBASIC15.3■□□□□ 0.04
Col23a1Q8K4G2 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col23a1Q8K4G2 Gm45342-201ENSMUST00000210903 1363 ntBASIC15.3■□□□□ 0.04
Col23a1Q8K4G2 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC15.3■□□□□ 0.04
Col23a1Q8K4G2 Gm19640-201ENSMUST00000214849 464 ntBASIC15.3■□□□□ 0.04
Col23a1Q8K4G2 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col23a1Q8K4G2 CT571245.2-201ENSMUST00000218421 305 ntBASIC15.3■□□□□ 0.04
Col23a1Q8K4G2 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col23a1Q8K4G2 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col23a1Q8K4G2 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Col23a1Q8K4G2 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col23a1Q8K4G2 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC15.3■□□□□ 0.04
Col23a1Q8K4G2 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col23a1Q8K4G2 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Col23a1Q8K4G2 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col23a1Q8K4G2 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col23a1Q8K4G2 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col23a1Q8K4G2 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col23a1Q8K4G2 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col23a1Q8K4G2 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col23a1Q8K4G2 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col23a1Q8K4G2 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col23a1Q8K4G2 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col23a1Q8K4G2 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col23a1Q8K4G2 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col23a1Q8K4G2 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col23a1Q8K4G2 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col23a1Q8K4G2 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col23a1Q8K4G2 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col23a1Q8K4G2 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col23a1Q8K4G2 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Col23a1Q8K4G2 Gm18159-201ENSMUST00000174516 1070 ntBASIC15.29■□□□□ 0.04
Col23a1Q8K4G2 Gm23045-201ENSMUST00000175041 96 ntBASIC15.29■□□□□ 0.04
Col23a1Q8K4G2 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC15.29■□□□□ 0.04
Col23a1Q8K4G2 Gm43778-201ENSMUST00000199438 199 ntBASIC15.29■□□□□ 0.04
Col23a1Q8K4G2 Gm5298-201ENSMUST00000201122 892 ntBASIC15.29■□□□□ 0.04
Col23a1Q8K4G2 Gm2875-201ENSMUST00000211333 360 ntBASIC15.29■□□□□ 0.04
Col23a1Q8K4G2 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col23a1Q8K4G2 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col23a1Q8K4G2 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Col23a1Q8K4G2 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col23a1Q8K4G2 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Col23a1Q8K4G2 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col23a1Q8K4G2 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC15.29■□□□□ 0.04
Col23a1Q8K4G2 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col23a1Q8K4G2 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col23a1Q8K4G2 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col23a1Q8K4G2 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Col23a1Q8K4G2 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col23a1Q8K4G2 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col23a1Q8K4G2 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col23a1Q8K4G2 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col23a1Q8K4G2 Gm26286-201ENSMUST00000104166 134 ntBASIC15.28■□□□□ 0.04
Col23a1Q8K4G2 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC15.28■□□□□ 0.04
Col23a1Q8K4G2 Gm8737-201ENSMUST00000122208 642 ntBASIC15.28■□□□□ 0.04
Col23a1Q8K4G2 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col23a1Q8K4G2 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC15.28■□□□□ 0.04
Col23a1Q8K4G2 Gm42779-201ENSMUST00000198807 406 ntBASIC15.28■□□□□ 0.04
Col23a1Q8K4G2 Gm42629-201ENSMUST00000199063 1102 ntBASIC15.28■□□□□ 0.04
Col23a1Q8K4G2 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC15.28■□□□□ 0.04
Col23a1Q8K4G2 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC15.28■□□□□ 0.04
Col23a1Q8K4G2 CT025553.1-201ENSMUST00000226292 299 ntBASIC15.28■□□□□ 0.04
Col23a1Q8K4G2 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col23a1Q8K4G2 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Col23a1Q8K4G2 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col23a1Q8K4G2 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col23a1Q8K4G2 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col23a1Q8K4G2 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col23a1Q8K4G2 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col23a1Q8K4G2 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col23a1Q8K4G2 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col23a1Q8K4G2 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col23a1Q8K4G2 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col23a1Q8K4G2 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col23a1Q8K4G2 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col23a1Q8K4G2 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col23a1Q8K4G2 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col23a1Q8K4G2 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Col23a1Q8K4G2 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col23a1Q8K4G2 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col23a1Q8K4G2 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Col23a1Q8K4G2 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col23a1Q8K4G2 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col23a1Q8K4G2 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Col23a1Q8K4G2 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col23a1Q8K4G2 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms