Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CopaQ8CIE6 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CopaQ8CIE6 Snora73a-201ENSMUST00000082453 205 ntBASIC13.05□□□□□ -0.32
CopaQ8CIE6 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CopaQ8CIE6 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CopaQ8CIE6 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CopaQ8CIE6 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CopaQ8CIE6 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.05□□□□□ -0.32
CopaQ8CIE6 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CopaQ8CIE6 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CopaQ8CIE6 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CopaQ8CIE6 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CopaQ8CIE6 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CopaQ8CIE6 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CopaQ8CIE6 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CopaQ8CIE6 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
CopaQ8CIE6 Gm18222-201ENSMUST00000202416 1387 ntBASIC13.05□□□□□ -0.32
CopaQ8CIE6 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CopaQ8CIE6 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CopaQ8CIE6 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CopaQ8CIE6 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CopaQ8CIE6 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CopaQ8CIE6 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CopaQ8CIE6 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CopaQ8CIE6 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CopaQ8CIE6 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CopaQ8CIE6 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CopaQ8CIE6 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CopaQ8CIE6 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.04□□□□□ -0.32
CopaQ8CIE6 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CopaQ8CIE6 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CopaQ8CIE6 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.04□□□□□ -0.32
CopaQ8CIE6 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CopaQ8CIE6 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CopaQ8CIE6 Gm6447-201ENSMUST00000118905 835 ntBASIC13.04□□□□□ -0.32
CopaQ8CIE6 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CopaQ8CIE6 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.04□□□□□ -0.32
CopaQ8CIE6 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.04□□□□□ -0.32
CopaQ8CIE6 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CopaQ8CIE6 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.04□□□□□ -0.32
CopaQ8CIE6 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CopaQ8CIE6 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.04□□□□□ -0.32
CopaQ8CIE6 Gm38002-201ENSMUST00000193255 180 ntBASIC13.04□□□□□ -0.32
CopaQ8CIE6 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CopaQ8CIE6 Gm44069-201ENSMUST00000204898 506 ntBASIC13.04□□□□□ -0.32
CopaQ8CIE6 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.04□□□□□ -0.32
CopaQ8CIE6 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.04□□□□□ -0.32
CopaQ8CIE6 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CopaQ8CIE6 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CopaQ8CIE6 Olfr582-201ENSMUST00000098212 960 ntBASIC13.04□□□□□ -0.32
CopaQ8CIE6 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.04□□□□□ -0.32
CopaQ8CIE6 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CopaQ8CIE6 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
CopaQ8CIE6 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
CopaQ8CIE6 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CopaQ8CIE6 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CopaQ8CIE6 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CopaQ8CIE6 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.04□□□□□ -0.32
CopaQ8CIE6 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CopaQ8CIE6 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CopaQ8CIE6 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CopaQ8CIE6 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CopaQ8CIE6 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CopaQ8CIE6 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CopaQ8CIE6 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CopaQ8CIE6 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CopaQ8CIE6 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CopaQ8CIE6 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CopaQ8CIE6 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.03□□□□□ -0.32
CopaQ8CIE6 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.03□□□□□ -0.32
CopaQ8CIE6 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CopaQ8CIE6 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CopaQ8CIE6 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.03□□□□□ -0.32
CopaQ8CIE6 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CopaQ8CIE6 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.03□□□□□ -0.32
CopaQ8CIE6 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC13.03□□□□□ -0.32
CopaQ8CIE6 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
CopaQ8CIE6 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.03□□□□□ -0.32
CopaQ8CIE6 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CopaQ8CIE6 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CopaQ8CIE6 Gm37008-201ENSMUST00000195712 319 ntBASIC13.03□□□□□ -0.32
CopaQ8CIE6 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CopaQ8CIE6 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
CopaQ8CIE6 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.03□□□□□ -0.32
CopaQ8CIE6 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.03□□□□□ -0.32
CopaQ8CIE6 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CopaQ8CIE6 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CopaQ8CIE6 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.03□□□□□ -0.32
CopaQ8CIE6 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CopaQ8CIE6 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CopaQ8CIE6 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.03□□□□□ -0.32
CopaQ8CIE6 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CopaQ8CIE6 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CopaQ8CIE6 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CopaQ8CIE6 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CopaQ8CIE6 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CopaQ8CIE6 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CopaQ8CIE6 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CopaQ8CIE6 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CopaQ8CIE6 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms