Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vcpip1Q8CDG3 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Vcpip1Q8CDG3 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vcpip1Q8CDG3 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vcpip1Q8CDG3 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vcpip1Q8CDG3 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.7□□□□□ -0.22
Vcpip1Q8CDG3 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vcpip1Q8CDG3 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vcpip1Q8CDG3 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Vcpip1Q8CDG3 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vcpip1Q8CDG3 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vcpip1Q8CDG3 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.7□□□□□ -0.22
Vcpip1Q8CDG3 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vcpip1Q8CDG3 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vcpip1Q8CDG3 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Vcpip1Q8CDG3 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Vcpip1Q8CDG3 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vcpip1Q8CDG3 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vcpip1Q8CDG3 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vcpip1Q8CDG3 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vcpip1Q8CDG3 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vcpip1Q8CDG3 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.7□□□□□ -0.22
Vcpip1Q8CDG3 Gm28693-202ENSMUST00000190758 331 ntBASIC13.7□□□□□ -0.22
Vcpip1Q8CDG3 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vcpip1Q8CDG3 Gm45331-201ENSMUST00000209868 554 ntBASIC13.7□□□□□ -0.22
Vcpip1Q8CDG3 Gm6458-201ENSMUST00000211573 635 ntBASIC13.7□□□□□ -0.22
Vcpip1Q8CDG3 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vcpip1Q8CDG3 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Vcpip1Q8CDG3 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vcpip1Q8CDG3 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vcpip1Q8CDG3 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Vcpip1Q8CDG3 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vcpip1Q8CDG3 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vcpip1Q8CDG3 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vcpip1Q8CDG3 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vcpip1Q8CDG3 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vcpip1Q8CDG3 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vcpip1Q8CDG3 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vcpip1Q8CDG3 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vcpip1Q8CDG3 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vcpip1Q8CDG3 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vcpip1Q8CDG3 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Vcpip1Q8CDG3 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vcpip1Q8CDG3 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vcpip1Q8CDG3 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vcpip1Q8CDG3 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vcpip1Q8CDG3 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vcpip1Q8CDG3 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.69□□□□□ -0.22
Vcpip1Q8CDG3 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vcpip1Q8CDG3 Gm12957-201ENSMUST00000117835 377 ntBASIC13.69□□□□□ -0.22
Vcpip1Q8CDG3 Gm8213-201ENSMUST00000118191 441 ntBASIC13.69□□□□□ -0.22
Vcpip1Q8CDG3 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.69□□□□□ -0.22
Vcpip1Q8CDG3 Gm10156-201ENSMUST00000122364 462 ntBASIC13.69□□□□□ -0.22
Vcpip1Q8CDG3 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.69□□□□□ -0.22
Vcpip1Q8CDG3 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Vcpip1Q8CDG3 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vcpip1Q8CDG3 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Vcpip1Q8CDG3 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.69□□□□□ -0.22
Vcpip1Q8CDG3 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.69□□□□□ -0.22
Vcpip1Q8CDG3 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vcpip1Q8CDG3 Gm38671-201ENSMUST00000200573 130 ntBASIC13.69□□□□□ -0.22
Vcpip1Q8CDG3 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.69□□□□□ -0.22
Vcpip1Q8CDG3 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vcpip1Q8CDG3 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.69□□□□□ -0.22
Vcpip1Q8CDG3 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vcpip1Q8CDG3 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.69□□□□□ -0.22
Vcpip1Q8CDG3 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.69□□□□□ -0.22
Vcpip1Q8CDG3 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.69□□□□□ -0.22
Vcpip1Q8CDG3 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vcpip1Q8CDG3 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vcpip1Q8CDG3 Gm5356-201ENSMUST00000093326 615 ntBASIC13.69□□□□□ -0.22
Vcpip1Q8CDG3 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.69□□□□□ -0.22
Vcpip1Q8CDG3 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.69□□□□□ -0.22
Vcpip1Q8CDG3 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vcpip1Q8CDG3 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.69□□□□□ -0.22
Vcpip1Q8CDG3 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vcpip1Q8CDG3 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Vcpip1Q8CDG3 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vcpip1Q8CDG3 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Vcpip1Q8CDG3 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vcpip1Q8CDG3 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.69□□□□□ -0.22
Vcpip1Q8CDG3 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vcpip1Q8CDG3 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vcpip1Q8CDG3 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Vcpip1Q8CDG3 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vcpip1Q8CDG3 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vcpip1Q8CDG3 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vcpip1Q8CDG3 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vcpip1Q8CDG3 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Vcpip1Q8CDG3 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vcpip1Q8CDG3 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vcpip1Q8CDG3 Gm11618-201ENSMUST00000117946 267 ntBASIC13.68□□□□□ -0.22
Vcpip1Q8CDG3 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vcpip1Q8CDG3 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vcpip1Q8CDG3 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vcpip1Q8CDG3 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.68□□□□□ -0.22
Vcpip1Q8CDG3 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.68□□□□□ -0.22
Vcpip1Q8CDG3 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vcpip1Q8CDG3 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vcpip1Q8CDG3 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms