Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lrif1Q8CDD9 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lrif1Q8CDD9 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lrif1Q8CDD9 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lrif1Q8CDD9 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Gm9002-201ENSMUST00000178437 499 ntBASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Gm18307-201ENSMUST00000206864 949 ntBASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lrif1Q8CDD9 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 Gm15806-201ENSMUST00000120696 955 ntBASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 Mir7654-201ENSMUST00000185082 70 ntBASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 Gm18187-201ENSMUST00000196476 984 ntBASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lrif1Q8CDD9 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms