Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Rft1Q8C3B8 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Rft1Q8C3B8 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rft1Q8C3B8 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.42□□□□□ -0.58
Rft1Q8C3B8 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.42□□□□□ -0.58
Rft1Q8C3B8 Gm45384-201ENSMUST00000210451 277 ntBASIC11.42□□□□□ -0.58
Rft1Q8C3B8 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rft1Q8C3B8 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.42□□□□□ -0.58
Rft1Q8C3B8 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rft1Q8C3B8 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rft1Q8C3B8 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rft1Q8C3B8 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.42□□□□□ -0.58
Rft1Q8C3B8 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rft1Q8C3B8 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rft1Q8C3B8 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rft1Q8C3B8 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rft1Q8C3B8 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rft1Q8C3B8 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rft1Q8C3B8 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.42□□□□□ -0.58
Rft1Q8C3B8 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.42□□□□□ -0.58
Rft1Q8C3B8 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rft1Q8C3B8 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rft1Q8C3B8 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rft1Q8C3B8 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.42□□□□□ -0.58
Rft1Q8C3B8 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rft1Q8C3B8 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rft1Q8C3B8 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rft1Q8C3B8 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rft1Q8C3B8 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rft1Q8C3B8 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rft1Q8C3B8 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Rft1Q8C3B8 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Rft1Q8C3B8 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rft1Q8C3B8 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rft1Q8C3B8 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rft1Q8C3B8 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rft1Q8C3B8 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Rft1Q8C3B8 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rft1Q8C3B8 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.41□□□□□ -0.58
Rft1Q8C3B8 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rft1Q8C3B8 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.41□□□□□ -0.58
Rft1Q8C3B8 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Rft1Q8C3B8 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rft1Q8C3B8 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.41□□□□□ -0.58
Rft1Q8C3B8 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC11.41□□□□□ -0.58
Rft1Q8C3B8 Gm27701-201ENSMUST00000184498 110 ntBASIC11.41□□□□□ -0.58
Rft1Q8C3B8 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.41□□□□□ -0.58
Rft1Q8C3B8 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rft1Q8C3B8 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Rft1Q8C3B8 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rft1Q8C3B8 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rft1Q8C3B8 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Rft1Q8C3B8 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Rft1Q8C3B8 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Rft1Q8C3B8 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rft1Q8C3B8 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rft1Q8C3B8 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rft1Q8C3B8 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Rft1Q8C3B8 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Rft1Q8C3B8 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rft1Q8C3B8 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rft1Q8C3B8 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.41□□□□□ -0.58
Rft1Q8C3B8 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Rft1Q8C3B8 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rft1Q8C3B8 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rft1Q8C3B8 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rft1Q8C3B8 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rft1Q8C3B8 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rft1Q8C3B8 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rft1Q8C3B8 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rft1Q8C3B8 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rft1Q8C3B8 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rft1Q8C3B8 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rft1Q8C3B8 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rft1Q8C3B8 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rft1Q8C3B8 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.4□□□□□ -0.58
Rft1Q8C3B8 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rft1Q8C3B8 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rft1Q8C3B8 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rft1Q8C3B8 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Rft1Q8C3B8 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rft1Q8C3B8 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rft1Q8C3B8 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rft1Q8C3B8 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rft1Q8C3B8 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rft1Q8C3B8 Gm11478-201ENSMUST00000117851 599 ntBASIC11.4□□□□□ -0.58
Rft1Q8C3B8 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.4□□□□□ -0.58
Rft1Q8C3B8 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rft1Q8C3B8 Gm28911-201ENSMUST00000188837 117 ntBASIC11.4□□□□□ -0.58
Rft1Q8C3B8 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.4□□□□□ -0.58
Rft1Q8C3B8 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rft1Q8C3B8 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.4□□□□□ -0.58
Rft1Q8C3B8 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.4□□□□□ -0.58
Rft1Q8C3B8 AC159006.1-201ENSMUST00000226396 258 ntBASIC11.4□□□□□ -0.58
Rft1Q8C3B8 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.4□□□□□ -0.58
Rft1Q8C3B8 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rft1Q8C3B8 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Rft1Q8C3B8 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Rft1Q8C3B8 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rft1Q8C3B8 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms