Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.91□□□□□ -0.34
Usp43Q8BUM9 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Usp43Q8BUM9 Gm13829-201ENSMUST00000119600 138 ntBASIC12.91□□□□□ -0.34
Usp43Q8BUM9 Gm15703-201ENSMUST00000120250 880 ntBASIC12.91□□□□□ -0.34
Usp43Q8BUM9 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.91□□□□□ -0.34
Usp43Q8BUM9 Gm27731-201ENSMUST00000185192 107 ntBASIC12.91□□□□□ -0.34
Usp43Q8BUM9 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.91□□□□□ -0.34
Usp43Q8BUM9 Gm18187-201ENSMUST00000196476 984 ntBASIC12.91□□□□□ -0.34
Usp43Q8BUM9 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.91□□□□□ -0.34
Usp43Q8BUM9 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp43Q8BUM9 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Usp43Q8BUM9 Gm24526-201ENSMUST00000082921 158 ntBASIC12.91□□□□□ -0.34
Usp43Q8BUM9 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp43Q8BUM9 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp43Q8BUM9 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp43Q8BUM9 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Usp43Q8BUM9 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp43Q8BUM9 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp43Q8BUM9 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Usp43Q8BUM9 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp43Q8BUM9 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Usp43Q8BUM9 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp43Q8BUM9 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp43Q8BUM9 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Usp43Q8BUM9 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp43Q8BUM9 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Usp43Q8BUM9 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp43Q8BUM9 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Usp43Q8BUM9 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp43Q8BUM9 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Usp43Q8BUM9 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Usp43Q8BUM9 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.9□□□□□ -0.34
Usp43Q8BUM9 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Usp43Q8BUM9 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp43Q8BUM9 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Usp43Q8BUM9 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp43Q8BUM9 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp43Q8BUM9 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp43Q8BUM9 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Usp43Q8BUM9 Gm13226-201ENSMUST00000117838 404 ntBASIC12.9□□□□□ -0.34
Usp43Q8BUM9 Gm14660-201ENSMUST00000119809 575 ntBASIC12.9□□□□□ -0.34
Usp43Q8BUM9 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Usp43Q8BUM9 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Usp43Q8BUM9 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.9□□□□□ -0.34
Usp43Q8BUM9 Gm45784-201ENSMUST00000188360 142 ntBASIC12.9□□□□□ -0.34
Usp43Q8BUM9 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.9□□□□□ -0.34
Usp43Q8BUM9 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp43Q8BUM9 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp43Q8BUM9 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.9□□□□□ -0.34
Usp43Q8BUM9 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp43Q8BUM9 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Usp43Q8BUM9 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp43Q8BUM9 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp43Q8BUM9 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp43Q8BUM9 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Usp43Q8BUM9 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp43Q8BUM9 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp43Q8BUM9 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.9□□□□□ -0.34
Usp43Q8BUM9 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Usp43Q8BUM9 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp43Q8BUM9 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usp43Q8BUM9 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Usp43Q8BUM9 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.9□□□□□ -0.35
Usp43Q8BUM9 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Usp43Q8BUM9 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Usp43Q8BUM9 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.89□□□□□ -0.35
Usp43Q8BUM9 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.89□□□□□ -0.35
Usp43Q8BUM9 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Usp43Q8BUM9 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Usp43Q8BUM9 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Usp43Q8BUM9 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Usp43Q8BUM9 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Usp43Q8BUM9 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Usp43Q8BUM9 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.89□□□□□ -0.35
Usp43Q8BUM9 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Usp43Q8BUM9 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Usp43Q8BUM9 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Usp43Q8BUM9 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Usp43Q8BUM9 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Usp43Q8BUM9 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.89□□□□□ -0.35
Usp43Q8BUM9 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Usp43Q8BUM9 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Usp43Q8BUM9 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Usp43Q8BUM9 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.89□□□□□ -0.35
Usp43Q8BUM9 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Usp43Q8BUM9 Gm15824-201ENSMUST00000119516 955 ntBASIC12.89□□□□□ -0.35
Usp43Q8BUM9 Gm11591-201ENSMUST00000120063 702 ntBASIC12.89□□□□□ -0.35
Usp43Q8BUM9 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.89□□□□□ -0.35
Usp43Q8BUM9 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.89□□□□□ -0.35
Usp43Q8BUM9 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Usp43Q8BUM9 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Usp43Q8BUM9 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Usp43Q8BUM9 Gm25927-201ENSMUST00000175058 117 ntBASIC12.89□□□□□ -0.35
Usp43Q8BUM9 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Usp43Q8BUM9 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.89□□□□□ -0.35
Usp43Q8BUM9 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Usp43Q8BUM9 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.89□□□□□ -0.35
Usp43Q8BUM9 Snora73a-201ENSMUST00000082453 205 ntBASIC12.89□□□□□ -0.35
Usp43Q8BUM9 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.89□□□□□ -0.35
Usp43Q8BUM9 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms