Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.14□□□□□ -0.47
Cdk5rap1Q8BTW8 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.14□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm20482-202ENSMUST00000174729 825 ntBASIC12.14□□□□□ -0.47
Cdk5rap1Q8BTW8 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Cdk5rap1Q8BTW8 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk5rap1Q8BTW8 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.14□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm27243-201ENSMUST00000183964 521 ntBASIC12.14□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.14□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.14□□□□□ -0.47
Cdk5rap1Q8BTW8 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.14□□□□□ -0.47
Cdk5rap1Q8BTW8 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk5rap1Q8BTW8 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cdk5rap1Q8BTW8 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Cdk5rap1Q8BTW8 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Cdk5rap1Q8BTW8 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk5rap1Q8BTW8 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.14□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.14□□□□□ -0.47
Cdk5rap1Q8BTW8 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk5rap1Q8BTW8 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Cdk5rap1Q8BTW8 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk5rap1Q8BTW8 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.14□□□□□ -0.47
Cdk5rap1Q8BTW8 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk5rap1Q8BTW8 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cdk5rap1Q8BTW8 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk5rap1Q8BTW8 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Cdk5rap1Q8BTW8 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap1Q8BTW8 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap1Q8BTW8 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap1Q8BTW8 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap1Q8BTW8 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap1Q8BTW8 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.13□□□□□ -0.47
Cdk5rap1Q8BTW8 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cdk5rap1Q8BTW8 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap1Q8BTW8 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.13□□□□□ -0.47
Cdk5rap1Q8BTW8 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap1Q8BTW8 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap1Q8BTW8 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap1Q8BTW8 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap1Q8BTW8 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.13□□□□□ -0.47
Cdk5rap1Q8BTW8 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm24255-201ENSMUST00000104481 128 ntBASIC12.13□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.13□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm26083-201ENSMUST00000157904 193 ntBASIC12.13□□□□□ -0.47
Cdk5rap1Q8BTW8 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm26956-201ENSMUST00000182176 986 ntBASIC12.13□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm37259-201ENSMUST00000193903 849 ntBASIC12.13□□□□□ -0.47
Cdk5rap1Q8BTW8 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.13□□□□□ -0.47
Cdk5rap1Q8BTW8 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.13□□□□□ -0.47
Cdk5rap1Q8BTW8 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap1Q8BTW8 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap1Q8BTW8 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap1Q8BTW8 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Cdk5rap1Q8BTW8 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap1Q8BTW8 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.13□□□□□ -0.47
Cdk5rap1Q8BTW8 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap1Q8BTW8 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap1Q8BTW8 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap1Q8BTW8 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cdk5rap1Q8BTW8 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap1Q8BTW8 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap1Q8BTW8 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap1Q8BTW8 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap1Q8BTW8 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap1Q8BTW8 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap1Q8BTW8 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap1Q8BTW8 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap1Q8BTW8 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdk5rap1Q8BTW8 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Cdk5rap1Q8BTW8 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.12□□□□□ -0.47
Cdk5rap1Q8BTW8 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.12□□□□□ -0.47
Cdk5rap1Q8BTW8 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap1Q8BTW8 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap1Q8BTW8 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap1Q8BTW8 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap1Q8BTW8 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap1Q8BTW8 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.12□□□□□ -0.47
Cdk5rap1Q8BTW8 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Cdk5rap1Q8BTW8 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap1Q8BTW8 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Cdk5rap1Q8BTW8 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm13813-201ENSMUST00000120998 787 ntBASIC12.12□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.12□□□□□ -0.47
Cdk5rap1Q8BTW8 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap1Q8BTW8 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cdk5rap1Q8BTW8 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.12□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm45925-201ENSMUST00000218882 744 ntBASIC12.12□□□□□ -0.47
Cdk5rap1Q8BTW8 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Cdk5rap1Q8BTW8 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.12□□□□□ -0.47
Cdk5rap1Q8BTW8 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap1Q8BTW8 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap1Q8BTW8 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap1Q8BTW8 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap1Q8BTW8 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms