Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf7Q8BTV2 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf7Q8BTV2 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf7Q8BTV2 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf7Q8BTV2 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf7Q8BTV2 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf7Q8BTV2 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf7Q8BTV2 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cpsf7Q8BTV2 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cpsf7Q8BTV2 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cpsf7Q8BTV2 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Cpsf7Q8BTV2 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cpsf7Q8BTV2 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cpsf7Q8BTV2 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.78□□□□□ -0.36
Cpsf7Q8BTV2 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.78□□□□□ -0.36
Cpsf7Q8BTV2 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cpsf7Q8BTV2 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Cpsf7Q8BTV2 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cpsf7Q8BTV2 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cpsf7Q8BTV2 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cpsf7Q8BTV2 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cpsf7Q8BTV2 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cpsf7Q8BTV2 Gm12859-201ENSMUST00000117834 427 ntBASIC12.78□□□□□ -0.36
Cpsf7Q8BTV2 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cpsf7Q8BTV2 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Cpsf7Q8BTV2 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.78□□□□□ -0.36
Cpsf7Q8BTV2 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cpsf7Q8BTV2 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cpsf7Q8BTV2 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cpsf7Q8BTV2 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cpsf7Q8BTV2 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cpsf7Q8BTV2 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Cpsf7Q8BTV2 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cpsf7Q8BTV2 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cpsf7Q8BTV2 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.78□□□□□ -0.36
Cpsf7Q8BTV2 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.78□□□□□ -0.36
Cpsf7Q8BTV2 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cpsf7Q8BTV2 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.78□□□□□ -0.36
Cpsf7Q8BTV2 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
Cpsf7Q8BTV2 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cpsf7Q8BTV2 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.77□□□□□ -0.36
Cpsf7Q8BTV2 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cpsf7Q8BTV2 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Cpsf7Q8BTV2 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cpsf7Q8BTV2 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.77□□□□□ -0.36
Cpsf7Q8BTV2 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Cpsf7Q8BTV2 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cpsf7Q8BTV2 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms