Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rd3Q8BRE0 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rd3Q8BRE0 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.52□□□□□ -0.24
Rd3Q8BRE0 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
Rd3Q8BRE0 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rd3Q8BRE0 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Rd3Q8BRE0 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rd3Q8BRE0 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rd3Q8BRE0 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rd3Q8BRE0 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rd3Q8BRE0 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rd3Q8BRE0 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rd3Q8BRE0 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
Rd3Q8BRE0 Gm11439-201ENSMUST00000118598 409 ntBASIC13.52□□□□□ -0.25
Rd3Q8BRE0 Gm12291-201ENSMUST00000121627 311 ntBASIC13.52□□□□□ -0.25
Rd3Q8BRE0 Gm26361-201ENSMUST00000158868 186 ntBASIC13.52□□□□□ -0.25
Rd3Q8BRE0 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rd3Q8BRE0 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rd3Q8BRE0 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rd3Q8BRE0 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Rd3Q8BRE0 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.52□□□□□ -0.25
Rd3Q8BRE0 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rd3Q8BRE0 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rd3Q8BRE0 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rd3Q8BRE0 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Rd3Q8BRE0 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rd3Q8BRE0 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rd3Q8BRE0 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rd3Q8BRE0 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rd3Q8BRE0 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rd3Q8BRE0 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Rd3Q8BRE0 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Rd3Q8BRE0 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rd3Q8BRE0 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rd3Q8BRE0 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rd3Q8BRE0 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rd3Q8BRE0 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rd3Q8BRE0 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rd3Q8BRE0 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rd3Q8BRE0 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rd3Q8BRE0 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.51□□□□□ -0.25
Rd3Q8BRE0 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rd3Q8BRE0 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rd3Q8BRE0 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Rd3Q8BRE0 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rd3Q8BRE0 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rd3Q8BRE0 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rd3Q8BRE0 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.51□□□□□ -0.25
Rd3Q8BRE0 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.51□□□□□ -0.25
Rd3Q8BRE0 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rd3Q8BRE0 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rd3Q8BRE0 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rd3Q8BRE0 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rd3Q8BRE0 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rd3Q8BRE0 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC13.51□□□□□ -0.25
Rd3Q8BRE0 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Rd3Q8BRE0 Gm14028-201ENSMUST00000117434 479 ntBASIC13.51□□□□□ -0.25
Rd3Q8BRE0 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rd3Q8BRE0 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rd3Q8BRE0 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.51□□□□□ -0.25
Rd3Q8BRE0 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Rd3Q8BRE0 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.51□□□□□ -0.25
Rd3Q8BRE0 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Rd3Q8BRE0 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.51□□□□□ -0.25
Rd3Q8BRE0 Gm25700-201ENSMUST00000177693 110 ntBASIC13.51□□□□□ -0.25
Rd3Q8BRE0 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rd3Q8BRE0 Gm8712-201ENSMUST00000221090 701 ntBASIC13.51□□□□□ -0.25
Rd3Q8BRE0 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rd3Q8BRE0 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rd3Q8BRE0 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rd3Q8BRE0 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rd3Q8BRE0 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rd3Q8BRE0 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rd3Q8BRE0 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rd3Q8BRE0 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rd3Q8BRE0 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rd3Q8BRE0 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Rd3Q8BRE0 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rd3Q8BRE0 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rd3Q8BRE0 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rd3Q8BRE0 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.51□□□□□ -0.25
Rd3Q8BRE0 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rd3Q8BRE0 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rd3Q8BRE0 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.5□□□□□ -0.25
Rd3Q8BRE0 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rd3Q8BRE0 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rd3Q8BRE0 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rd3Q8BRE0 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rd3Q8BRE0 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rd3Q8BRE0 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Rd3Q8BRE0 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rd3Q8BRE0 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.5□□□□□ -0.25
Rd3Q8BRE0 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rd3Q8BRE0 Gm5846-201ENSMUST00000193146 1414 ntBASIC13.5□□□□□ -0.25
Rd3Q8BRE0 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rd3Q8BRE0 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rd3Q8BRE0 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rd3Q8BRE0 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rd3Q8BRE0 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rd3Q8BRE0 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms