Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Cpsf4Q8BQZ5 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4Q8BQZ5 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.39□□□□□ -0.43
Cpsf4Q8BQZ5 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4Q8BQZ5 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4Q8BQZ5 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4Q8BQZ5 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4Q8BQZ5 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4Q8BQZ5 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.39□□□□□ -0.43
Cpsf4Q8BQZ5 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4Q8BQZ5 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4Q8BQZ5 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4Q8BQZ5 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cpsf4Q8BQZ5 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 Gm13369-201ENSMUST00000119442 987 ntBASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 Gm14660-201ENSMUST00000119809 575 ntBASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 Gm43438-201ENSMUST00000198133 379 ntBASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Cpsf4Q8BQZ5 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpsf4Q8BQZ5 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpsf4Q8BQZ5 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Cpsf4Q8BQZ5 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Cpsf4Q8BQZ5 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Cpsf4Q8BQZ5 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpsf4Q8BQZ5 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cpsf4Q8BQZ5 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpsf4Q8BQZ5 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpsf4Q8BQZ5 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.37□□□□□ -0.43
Cpsf4Q8BQZ5 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpsf4Q8BQZ5 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.37□□□□□ -0.43
Cpsf4Q8BQZ5 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpsf4Q8BQZ5 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.37□□□□□ -0.43
Cpsf4Q8BQZ5 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpsf4Q8BQZ5 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.37□□□□□ -0.43
Cpsf4Q8BQZ5 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.37□□□□□ -0.43
Cpsf4Q8BQZ5 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.37□□□□□ -0.43
Cpsf4Q8BQZ5 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.37□□□□□ -0.43
Cpsf4Q8BQZ5 Gm27731-201ENSMUST00000185192 107 ntBASIC12.37□□□□□ -0.43
Cpsf4Q8BQZ5 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Cpsf4Q8BQZ5 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Cpsf4Q8BQZ5 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.37□□□□□ -0.43
Cpsf4Q8BQZ5 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cpsf4Q8BQZ5 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.37□□□□□ -0.43
Cpsf4Q8BQZ5 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.37□□□□□ -0.43
Cpsf4Q8BQZ5 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.37□□□□□ -0.43
Cpsf4Q8BQZ5 Gm29705-201ENSMUST00000212598 474 ntBASIC12.37□□□□□ -0.43
Cpsf4Q8BQZ5 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.37□□□□□ -0.43
Cpsf4Q8BQZ5 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpsf4Q8BQZ5 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.37□□□□□ -0.43
Cpsf4Q8BQZ5 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Cpsf4Q8BQZ5 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpsf4Q8BQZ5 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpsf4Q8BQZ5 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpsf4Q8BQZ5 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Cpsf4Q8BQZ5 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.37□□□□□ -0.43
Cpsf4Q8BQZ5 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms