Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Gm6415-201ENSMUST00000118488 348 ntBASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Gm6161-201ENSMUST00000121942 1102 ntBASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Gm6254-201ENSMUST00000168178 1072 ntBASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Gm6153-201ENSMUST00000172004 1058 ntBASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Gm10253-201ENSMUST00000194270 940 ntBASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Gm5641-202ENSMUST00000198699 1080 ntBASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Gm7774-201ENSMUST00000200064 533 ntBASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Gm17330-201ENSMUST00000221047 165 ntBASIC10.49□□□□□ -0.73
Smco3Q8BQM7 CT573086.1-201ENSMUST00000227202 1074 ntBASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Adra1a-206ENSMUST00000225182 2337 ntBASIC10.49□□□□□ -0.73
Smco3Q8BQM7 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco3Q8BQM7 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco3Q8BQM7 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco3Q8BQM7 Gm9025-201ENSMUST00000122415 1575 ntBASIC10.48□□□□□ -0.73
Smco3Q8BQM7 AC113060.1-201ENSMUST00000225689 1573 ntBASIC10.48□□□□□ -0.73
Smco3Q8BQM7 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco3Q8BQM7 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Smco3Q8BQM7 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC10.48□□□□□ -0.73
Smco3Q8BQM7 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.48□□□□□ -0.73
Smco3Q8BQM7 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Smco3Q8BQM7 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Smco3Q8BQM7 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco3Q8BQM7 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Smco3Q8BQM7 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco3Q8BQM7 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco3Q8BQM7 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco3Q8BQM7 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco3Q8BQM7 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco3Q8BQM7 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco3Q8BQM7 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco3Q8BQM7 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Smco3Q8BQM7 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC10.48□□□□□ -0.73
Smco3Q8BQM7 Gm7820-201ENSMUST00000121012 1052 ntBASIC10.48□□□□□ -0.73
Smco3Q8BQM7 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC10.48□□□□□ -0.73
Smco3Q8BQM7 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco3Q8BQM7 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
Smco3Q8BQM7 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC10.48□□□□□ -0.73
Smco3Q8BQM7 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC10.48□□□□□ -0.73
Smco3Q8BQM7 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC10.48□□□□□ -0.73
Smco3Q8BQM7 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC10.48□□□□□ -0.73
Smco3Q8BQM7 Gm18905-201ENSMUST00000205454 928 ntBASIC10.48□□□□□ -0.73
Smco3Q8BQM7 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Smco3Q8BQM7 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Smco3Q8BQM7 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms