Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.88□□□□□ -0.51
Atg4dQ8BGV9 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Atg4dQ8BGV9 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.88□□□□□ -0.51
Atg4dQ8BGV9 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Atg4dQ8BGV9 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.88□□□□□ -0.51
Atg4dQ8BGV9 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Atg4dQ8BGV9 Gm9899-201ENSMUST00000065519 555 ntBASIC11.88□□□□□ -0.51
Atg4dQ8BGV9 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Atg4dQ8BGV9 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Atg4dQ8BGV9 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.88□□□□□ -0.51
Atg4dQ8BGV9 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Atg4dQ8BGV9 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Atg4dQ8BGV9 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Atg4dQ8BGV9 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Atg4dQ8BGV9 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Atg4dQ8BGV9 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Atg4dQ8BGV9 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Atg4dQ8BGV9 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Atg4dQ8BGV9 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Atg4dQ8BGV9 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Atg4dQ8BGV9 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Atg4dQ8BGV9 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.88□□□□□ -0.51
Atg4dQ8BGV9 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Atg4dQ8BGV9 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Atg4dQ8BGV9 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.88□□□□□ -0.51
Atg4dQ8BGV9 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.88□□□□□ -0.51
Atg4dQ8BGV9 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.87□□□□□ -0.51
Atg4dQ8BGV9 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Atg4dQ8BGV9 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Atg4dQ8BGV9 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Atg4dQ8BGV9 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Atg4dQ8BGV9 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Atg4dQ8BGV9 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Atg4dQ8BGV9 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.87□□□□□ -0.51
Atg4dQ8BGV9 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Atg4dQ8BGV9 Gm14760-201ENSMUST00000121831 999 ntBASIC11.87□□□□□ -0.51
Atg4dQ8BGV9 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.87□□□□□ -0.51
Atg4dQ8BGV9 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.87□□□□□ -0.51
Atg4dQ8BGV9 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Atg4dQ8BGV9 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.87□□□□□ -0.51
Atg4dQ8BGV9 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.87□□□□□ -0.51
Atg4dQ8BGV9 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Atg4dQ8BGV9 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Atg4dQ8BGV9 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Atg4dQ8BGV9 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Atg4dQ8BGV9 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.87□□□□□ -0.51
Atg4dQ8BGV9 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Atg4dQ8BGV9 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Atg4dQ8BGV9 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Atg4dQ8BGV9 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.87□□□□□ -0.51
Atg4dQ8BGV9 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Atg4dQ8BGV9 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Atg4dQ8BGV9 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Atg4dQ8BGV9 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Atg4dQ8BGV9 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Atg4dQ8BGV9 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Atg4dQ8BGV9 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Atg4dQ8BGV9 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atg4dQ8BGV9 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atg4dQ8BGV9 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.86□□□□□ -0.51
Atg4dQ8BGV9 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atg4dQ8BGV9 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atg4dQ8BGV9 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Atg4dQ8BGV9 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Atg4dQ8BGV9 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Atg4dQ8BGV9 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atg4dQ8BGV9 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atg4dQ8BGV9 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC11.86□□□□□ -0.51
Atg4dQ8BGV9 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atg4dQ8BGV9 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Atg4dQ8BGV9 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atg4dQ8BGV9 Gm10434-201ENSMUST00000101158 471 ntBASIC11.86□□□□□ -0.51
Atg4dQ8BGV9 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atg4dQ8BGV9 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.86□□□□□ -0.51
Atg4dQ8BGV9 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atg4dQ8BGV9 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Atg4dQ8BGV9 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.86□□□□□ -0.51
Atg4dQ8BGV9 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.86□□□□□ -0.51
Atg4dQ8BGV9 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.86□□□□□ -0.51
Atg4dQ8BGV9 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.86□□□□□ -0.51
Atg4dQ8BGV9 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.86□□□□□ -0.51
Atg4dQ8BGV9 Gm29396-201ENSMUST00000185659 716 ntBASIC11.86□□□□□ -0.51
Atg4dQ8BGV9 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Atg4dQ8BGV9 Olfr284-202ENSMUST00000206647 966 ntBASIC11.86□□□□□ -0.51
Atg4dQ8BGV9 Gm7046-201ENSMUST00000221351 977 ntBASIC11.86□□□□□ -0.51
Atg4dQ8BGV9 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.86□□□□□ -0.51
Atg4dQ8BGV9 Gm7399-201ENSMUST00000032395 858 ntBASIC11.86□□□□□ -0.51
Atg4dQ8BGV9 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Atg4dQ8BGV9 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.86□□□□□ -0.51
Atg4dQ8BGV9 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atg4dQ8BGV9 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.86□□□□□ -0.51
Atg4dQ8BGV9 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atg4dQ8BGV9 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atg4dQ8BGV9 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Atg4dQ8BGV9 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atg4dQ8BGV9 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.86□□□□□ -0.51
Atg4dQ8BGV9 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atg4dQ8BGV9 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Atg4dQ8BGV9 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Atg4dQ8BGV9 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms