Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc116Q80X53 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Gm11637-201ENSMUST00000120601 592 ntBASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Gm15806-201ENSMUST00000120696 955 ntBASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Gm12363-201ENSMUST00000122250 668 ntBASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Gm22331-201ENSMUST00000158066 136 ntBASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Gm7029-201ENSMUST00000173226 450 ntBASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Gm9002-201ENSMUST00000178437 499 ntBASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Gm32025-201ENSMUST00000217960 307 ntBASIC12.5□□□□□ -0.41
Ccdc116Q80X53 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc116Q80X53 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.5□□□□□ -0.41
Ccdc116Q80X53 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ccdc116Q80X53 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ccdc116Q80X53 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc116Q80X53 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc116Q80X53 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc116Q80X53 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc116Q80X53 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc116Q80X53 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.49□□□□□ -0.41
Ccdc116Q80X53 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ccdc116Q80X53 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ccdc116Q80X53 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc116Q80X53 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc116Q80X53 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc116Q80X53 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc116Q80X53 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ccdc116Q80X53 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ccdc116Q80X53 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.49□□□□□ -0.41
Ccdc116Q80X53 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc116Q80X53 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.49□□□□□ -0.41
Ccdc116Q80X53 Gm17208-201ENSMUST00000168388 535 ntBASIC12.49□□□□□ -0.41
Ccdc116Q80X53 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Ccdc116Q80X53 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.49□□□□□ -0.41
Ccdc116Q80X53 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.49□□□□□ -0.41
Ccdc116Q80X53 Gm7561-201ENSMUST00000211203 886 ntBASIC12.49□□□□□ -0.41
Ccdc116Q80X53 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.49□□□□□ -0.41
Ccdc116Q80X53 AC132446.1-201ENSMUST00000222655 226 ntBASIC12.49□□□□□ -0.41
Ccdc116Q80X53 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.49□□□□□ -0.41
Ccdc116Q80X53 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc116Q80X53 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc116Q80X53 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc116Q80X53 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc116Q80X53 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.49□□□□□ -0.41
Ccdc116Q80X53 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc116Q80X53 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc116Q80X53 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc116Q80X53 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ccdc116Q80X53 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc116Q80X53 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc116Q80X53 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc116Q80X53 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc116Q80X53 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc116Q80X53 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc116Q80X53 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.48□□□□□ -0.41
Ccdc116Q80X53 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc116Q80X53 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc116Q80X53 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc116Q80X53 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc116Q80X53 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms