Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.34□□□□□ -0.43
Trim36Q80WG7 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim36Q80WG7 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.34□□□□□ -0.43
Trim36Q80WG7 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Trim36Q80WG7 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim36Q80WG7 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim36Q80WG7 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim36Q80WG7 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim36Q80WG7 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim36Q80WG7 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim36Q80WG7 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.33□□□□□ -0.44
Trim36Q80WG7 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim36Q80WG7 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim36Q80WG7 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.33□□□□□ -0.44
Trim36Q80WG7 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim36Q80WG7 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim36Q80WG7 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim36Q80WG7 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.33□□□□□ -0.44
Trim36Q80WG7 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim36Q80WG7 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Trim36Q80WG7 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.33□□□□□ -0.44
Trim36Q80WG7 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim36Q80WG7 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim36Q80WG7 Gm7287-201ENSMUST00000205267 602 ntBASIC12.33□□□□□ -0.44
Trim36Q80WG7 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim36Q80WG7 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.33□□□□□ -0.44
Trim36Q80WG7 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim36Q80WG7 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim36Q80WG7 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.33□□□□□ -0.44
Trim36Q80WG7 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim36Q80WG7 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim36Q80WG7 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim36Q80WG7 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trim36Q80WG7 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim36Q80WG7 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim36Q80WG7 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim36Q80WG7 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trim36Q80WG7 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trim36Q80WG7 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trim36Q80WG7 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim36Q80WG7 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim36Q80WG7 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trim36Q80WG7 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim36Q80WG7 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim36Q80WG7 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim36Q80WG7 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim36Q80WG7 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim36Q80WG7 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim36Q80WG7 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim36Q80WG7 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.33□□□□□ -0.44
Trim36Q80WG7 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim36Q80WG7 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim36Q80WG7 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim36Q80WG7 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim36Q80WG7 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.33□□□□□ -0.44
Trim36Q80WG7 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trim36Q80WG7 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim36Q80WG7 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Trim36Q80WG7 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim36Q80WG7 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim36Q80WG7 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim36Q80WG7 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim36Q80WG7 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.32□□□□□ -0.44
Trim36Q80WG7 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim36Q80WG7 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim36Q80WG7 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim36Q80WG7 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.32□□□□□ -0.44
Trim36Q80WG7 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.32□□□□□ -0.44
Trim36Q80WG7 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim36Q80WG7 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim36Q80WG7 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trim36Q80WG7 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.32□□□□□ -0.44
Trim36Q80WG7 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim36Q80WG7 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trim36Q80WG7 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.32□□□□□ -0.44
Trim36Q80WG7 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.32□□□□□ -0.44
Trim36Q80WG7 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trim36Q80WG7 Gm8652-201ENSMUST00000181363 964 ntBASIC12.32□□□□□ -0.44
Trim36Q80WG7 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.32□□□□□ -0.44
Trim36Q80WG7 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.32□□□□□ -0.44
Trim36Q80WG7 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim36Q80WG7 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim36Q80WG7 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trim36Q80WG7 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim36Q80WG7 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trim36Q80WG7 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim36Q80WG7 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim36Q80WG7 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim36Q80WG7 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.32□□□□□ -0.44
Trim36Q80WG7 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim36Q80WG7 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim36Q80WG7 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim36Q80WG7 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim36Q80WG7 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trim36Q80WG7 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim36Q80WG7 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim36Q80WG7 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim36Q80WG7 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trim36Q80WG7 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim36Q80WG7 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms