Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.2□□□□□ -0.3
Trim62Q80V85 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim62Q80V85 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim62Q80V85 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim62Q80V85 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim62Q80V85 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim62Q80V85 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim62Q80V85 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim62Q80V85 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim62Q80V85 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim62Q80V85 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trim62Q80V85 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trim62Q80V85 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim62Q80V85 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim62Q80V85 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim62Q80V85 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim62Q80V85 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim62Q80V85 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.19□□□□□ -0.3
Trim62Q80V85 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim62Q80V85 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim62Q80V85 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trim62Q80V85 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.19□□□□□ -0.3
Trim62Q80V85 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim62Q80V85 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim62Q80V85 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Trim62Q80V85 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim62Q80V85 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim62Q80V85 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.19□□□□□ -0.3
Trim62Q80V85 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.19□□□□□ -0.3
Trim62Q80V85 Gm8018-201ENSMUST00000173536 789 ntBASIC13.19□□□□□ -0.3
Trim62Q80V85 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.19□□□□□ -0.3
Trim62Q80V85 Gm43118-201ENSMUST00000199149 775 ntBASIC13.19□□□□□ -0.3
Trim62Q80V85 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.19□□□□□ -0.3
Trim62Q80V85 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim62Q80V85 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.19□□□□□ -0.3
Trim62Q80V85 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim62Q80V85 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim62Q80V85 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim62Q80V85 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.19□□□□□ -0.3
Trim62Q80V85 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.19□□□□□ -0.3
Trim62Q80V85 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim62Q80V85 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim62Q80V85 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trim62Q80V85 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim62Q80V85 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim62Q80V85 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim62Q80V85 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trim62Q80V85 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim62Q80V85 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.19□□□□□ -0.3
Trim62Q80V85 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Trim62Q80V85 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim62Q80V85 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim62Q80V85 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim62Q80V85 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Trim62Q80V85 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim62Q80V85 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim62Q80V85 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim62Q80V85 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trim62Q80V85 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim62Q80V85 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim62Q80V85 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trim62Q80V85 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim62Q80V85 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim62Q80V85 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.18□□□□□ -0.3
Trim62Q80V85 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim62Q80V85 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.18□□□□□ -0.3
Trim62Q80V85 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim62Q80V85 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim62Q80V85 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.18□□□□□ -0.3
Trim62Q80V85 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim62Q80V85 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.18□□□□□ -0.3
Trim62Q80V85 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.18□□□□□ -0.3
Trim62Q80V85 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.18□□□□□ -0.3
Trim62Q80V85 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim62Q80V85 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim62Q80V85 Gm22058-201ENSMUST00000083393 310 ntBASIC13.18□□□□□ -0.3
Trim62Q80V85 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Trim62Q80V85 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim62Q80V85 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim62Q80V85 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim62Q80V85 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim62Q80V85 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim62Q80V85 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim62Q80V85 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim62Q80V85 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim62Q80V85 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim62Q80V85 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Trim62Q80V85 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim62Q80V85 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim62Q80V85 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim62Q80V85 Daam2-202ENSMUST00000224595 1926 ntBASIC13.17□□□□□ -0.3
Trim62Q80V85 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trim62Q80V85 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.17□□□□□ -0.3
Trim62Q80V85 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.17□□□□□ -0.3
Trim62Q80V85 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.17□□□□□ -0.3
Trim62Q80V85 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim62Q80V85 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim62Q80V85 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim62Q80V85 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim62Q80V85 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms