Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp8Q80U87 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usp8Q80U87 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Usp8Q80U87 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp8Q80U87 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp8Q80U87 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp8Q80U87 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp8Q80U87 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp8Q80U87 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp8Q80U87 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp8Q80U87 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usp8Q80U87 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp8Q80U87 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp8Q80U87 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp8Q80U87 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usp8Q80U87 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp8Q80U87 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usp8Q80U87 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Usp8Q80U87 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp8Q80U87 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp8Q80U87 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.81□□□□□ -0.36
Usp8Q80U87 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp8Q80U87 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp8Q80U87 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Usp8Q80U87 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp8Q80U87 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp8Q80U87 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Usp8Q80U87 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Usp8Q80U87 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp8Q80U87 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usp8Q80U87 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.81□□□□□ -0.36
Usp8Q80U87 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.81□□□□□ -0.36
Usp8Q80U87 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp8Q80U87 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.81□□□□□ -0.36
Usp8Q80U87 Gm45668-201ENSMUST00000211271 493 ntBASIC12.81□□□□□ -0.36
Usp8Q80U87 Gm18473-201ENSMUST00000220543 868 ntBASIC12.81□□□□□ -0.36
Usp8Q80U87 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.81□□□□□ -0.36
Usp8Q80U87 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.81□□□□□ -0.36
Usp8Q80U87 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp8Q80U87 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usp8Q80U87 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp8Q80U87 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Usp8Q80U87 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp8Q80U87 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp8Q80U87 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Usp8Q80U87 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usp8Q80U87 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.81□□□□□ -0.36
Usp8Q80U87 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp8Q80U87 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp8Q80U87 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp8Q80U87 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp8Q80U87 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Usp8Q80U87 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp8Q80U87 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp8Q80U87 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usp8Q80U87 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp8Q80U87 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp8Q80U87 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp8Q80U87 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp8Q80U87 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp8Q80U87 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Usp8Q80U87 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp8Q80U87 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp8Q80U87 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp8Q80U87 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.8□□□□□ -0.36
Usp8Q80U87 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp8Q80U87 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Usp8Q80U87 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Usp8Q80U87 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp8Q80U87 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp8Q80U87 Gm16202-201ENSMUST00000117532 544 ntBASIC12.8□□□□□ -0.36
Usp8Q80U87 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.8□□□□□ -0.36
Usp8Q80U87 Gm6152-201ENSMUST00000151704 340 ntBASIC12.8□□□□□ -0.36
Usp8Q80U87 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.8□□□□□ -0.36
Usp8Q80U87 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp8Q80U87 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Usp8Q80U87 Gm16372-201ENSMUST00000073088 450 ntBASIC12.8□□□□□ -0.36
Usp8Q80U87 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp8Q80U87 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp8Q80U87 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp8Q80U87 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp8Q80U87 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Usp8Q80U87 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp8Q80U87 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp8Q80U87 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp8Q80U87 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp8Q80U87 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Usp8Q80U87 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp8Q80U87 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp8Q80U87 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.8□□□□□ -0.36
Usp8Q80U87 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp8Q80U87 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.8□□□□□ -0.36
Usp8Q80U87 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp8Q80U87 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.79□□□□□ -0.36
Usp8Q80U87 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.79□□□□□ -0.36
Usp8Q80U87 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp8Q80U87 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp8Q80U87 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.79□□□□□ -0.36
Usp8Q80U87 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.79□□□□□ -0.36
Usp8Q80U87 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms