Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Scaf4Q6PFF0 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scaf4Q6PFF0 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scaf4Q6PFF0 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scaf4Q6PFF0 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scaf4Q6PFF0 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scaf4Q6PFF0 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scaf4Q6PFF0 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.57□□□□□ -0.4
Scaf4Q6PFF0 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scaf4Q6PFF0 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scaf4Q6PFF0 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.56□□□□□ -0.4
Scaf4Q6PFF0 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Scaf4Q6PFF0 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scaf4Q6PFF0 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scaf4Q6PFF0 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scaf4Q6PFF0 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.56□□□□□ -0.4
Scaf4Q6PFF0 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scaf4Q6PFF0 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scaf4Q6PFF0 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Scaf4Q6PFF0 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scaf4Q6PFF0 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scaf4Q6PFF0 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Scaf4Q6PFF0 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scaf4Q6PFF0 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Scaf4Q6PFF0 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scaf4Q6PFF0 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scaf4Q6PFF0 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scaf4Q6PFF0 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.56□□□□□ -0.4
Scaf4Q6PFF0 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scaf4Q6PFF0 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC12.56□□□□□ -0.4
Scaf4Q6PFF0 Gm10576-201ENSMUST00000191927 825 ntBASIC12.56□□□□□ -0.4
Scaf4Q6PFF0 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.56□□□□□ -0.4
Scaf4Q6PFF0 Gm6983-201ENSMUST00000214912 628 ntBASIC12.56□□□□□ -0.4
Scaf4Q6PFF0 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scaf4Q6PFF0 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scaf4Q6PFF0 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scaf4Q6PFF0 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Scaf4Q6PFF0 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scaf4Q6PFF0 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.56□□□□□ -0.4
Scaf4Q6PFF0 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Scaf4Q6PFF0 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scaf4Q6PFF0 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scaf4Q6PFF0 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Scaf4Q6PFF0 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Scaf4Q6PFF0 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scaf4Q6PFF0 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scaf4Q6PFF0 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.56□□□□□ -0.4
Scaf4Q6PFF0 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scaf4Q6PFF0 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scaf4Q6PFF0 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scaf4Q6PFF0 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scaf4Q6PFF0 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.55□□□□□ -0.4
Scaf4Q6PFF0 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scaf4Q6PFF0 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scaf4Q6PFF0 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scaf4Q6PFF0 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scaf4Q6PFF0 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scaf4Q6PFF0 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.55□□□□□ -0.4
Scaf4Q6PFF0 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.55□□□□□ -0.4
Scaf4Q6PFF0 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Scaf4Q6PFF0 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scaf4Q6PFF0 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scaf4Q6PFF0 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.55□□□□□ -0.4
Scaf4Q6PFF0 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.55□□□□□ -0.4
Scaf4Q6PFF0 Mir7684-201ENSMUST00000183858 60 ntBASIC12.55□□□□□ -0.4
Scaf4Q6PFF0 Gm44397-201ENSMUST00000195950 113 ntBASIC12.55□□□□□ -0.4
Scaf4Q6PFF0 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.55□□□□□ -0.4
Scaf4Q6PFF0 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.55□□□□□ -0.4
Scaf4Q6PFF0 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.55□□□□□ -0.4
Scaf4Q6PFF0 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Scaf4Q6PFF0 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scaf4Q6PFF0 Mir339-201ENSMUST00000083659 96 ntBASIC12.55□□□□□ -0.4
Scaf4Q6PFF0 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Scaf4Q6PFF0 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scaf4Q6PFF0 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scaf4Q6PFF0 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scaf4Q6PFF0 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scaf4Q6PFF0 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.55□□□□□ -0.4
Scaf4Q6PFF0 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Scaf4Q6PFF0 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scaf4Q6PFF0 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scaf4Q6PFF0 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scaf4Q6PFF0 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scaf4Q6PFF0 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scaf4Q6PFF0 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scaf4Q6PFF0 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.55□□□□□ -0.4
Scaf4Q6PFF0 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Scaf4Q6PFF0 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scaf4Q6PFF0 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scaf4Q6PFF0 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.55□□□□□ -0.4
Scaf4Q6PFF0 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Scaf4Q6PFF0 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Scaf4Q6PFF0 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scaf4Q6PFF0 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Scaf4Q6PFF0 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scaf4Q6PFF0 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.54□□□□□ -0.4
Scaf4Q6PFF0 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Scaf4Q6PFF0 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scaf4Q6PFF0 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Scaf4Q6PFF0 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms