Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Rnf220Q6PDX6 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf220Q6PDX6 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf220Q6PDX6 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf220Q6PDX6 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.09□□□□□ -0.47
Rnf220Q6PDX6 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.09□□□□□ -0.47
Rnf220Q6PDX6 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf220Q6PDX6 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.09□□□□□ -0.47
Rnf220Q6PDX6 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf220Q6PDX6 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Rnf220Q6PDX6 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf220Q6PDX6 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf220Q6PDX6 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf220Q6PDX6 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Rnf220Q6PDX6 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf220Q6PDX6 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf220Q6PDX6 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf220Q6PDX6 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf220Q6PDX6 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf220Q6PDX6 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Rnf220Q6PDX6 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.09□□□□□ -0.47
Rnf220Q6PDX6 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.09□□□□□ -0.47
Rnf220Q6PDX6 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf220Q6PDX6 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.09□□□□□ -0.47
Rnf220Q6PDX6 Gm4804-201ENSMUST00000182234 999 ntBASIC12.09□□□□□ -0.47
Rnf220Q6PDX6 Gm2213-201ENSMUST00000197485 688 ntBASIC12.09□□□□□ -0.47
Rnf220Q6PDX6 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.09□□□□□ -0.47
Rnf220Q6PDX6 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC12.09□□□□□ -0.47
Rnf220Q6PDX6 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf220Q6PDX6 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf220Q6PDX6 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.09□□□□□ -0.47
Rnf220Q6PDX6 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf220Q6PDX6 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf220Q6PDX6 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf220Q6PDX6 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf220Q6PDX6 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf220Q6PDX6 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf220Q6PDX6 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf220Q6PDX6 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.09□□□□□ -0.47
Rnf220Q6PDX6 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf220Q6PDX6 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf220Q6PDX6 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf220Q6PDX6 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf220Q6PDX6 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf220Q6PDX6 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Rnf220Q6PDX6 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rnf220Q6PDX6 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rnf220Q6PDX6 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rnf220Q6PDX6 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rnf220Q6PDX6 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.08□□□□□ -0.47
Rnf220Q6PDX6 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rnf220Q6PDX6 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Rnf220Q6PDX6 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf220Q6PDX6 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf220Q6PDX6 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Rnf220Q6PDX6 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf220Q6PDX6 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf220Q6PDX6 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.08□□□□□ -0.48
Rnf220Q6PDX6 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf220Q6PDX6 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf220Q6PDX6 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf220Q6PDX6 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf220Q6PDX6 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf220Q6PDX6 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Rnf220Q6PDX6 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Rnf220Q6PDX6 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Rnf220Q6PDX6 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.08□□□□□ -0.48
Rnf220Q6PDX6 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf220Q6PDX6 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.08□□□□□ -0.48
Rnf220Q6PDX6 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf220Q6PDX6 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf220Q6PDX6 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.08□□□□□ -0.48
Rnf220Q6PDX6 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf220Q6PDX6 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.08□□□□□ -0.48
Rnf220Q6PDX6 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.08□□□□□ -0.48
Rnf220Q6PDX6 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf220Q6PDX6 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Rnf220Q6PDX6 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf220Q6PDX6 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf220Q6PDX6 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf220Q6PDX6 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf220Q6PDX6 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf220Q6PDX6 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf220Q6PDX6 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf220Q6PDX6 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf220Q6PDX6 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.08□□□□□ -0.48
Rnf220Q6PDX6 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.08□□□□□ -0.48
Rnf220Q6PDX6 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.08□□□□□ -0.48
Rnf220Q6PDX6 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Rnf220Q6PDX6 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf220Q6PDX6 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf220Q6PDX6 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf220Q6PDX6 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf220Q6PDX6 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Rnf220Q6PDX6 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf220Q6PDX6 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf220Q6PDX6 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf220Q6PDX6 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms