Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcc2Q6PDG5 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcc2Q6PDG5 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcc2Q6PDG5 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcc2Q6PDG5 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcc2Q6PDG5 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcc2Q6PDG5 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Smarcc2Q6PDG5 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smarcc2Q6PDG5 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Smarcc2Q6PDG5 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcc2Q6PDG5 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcc2Q6PDG5 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcc2Q6PDG5 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC14.88□□□□□ -0.03
Smarcc2Q6PDG5 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.88□□□□□ -0.03
Smarcc2Q6PDG5 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcc2Q6PDG5 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Smarcc2Q6PDG5 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcc2Q6PDG5 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcc2Q6PDG5 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcc2Q6PDG5 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcc2Q6PDG5 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcc2Q6PDG5 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC14.88□□□□□ -0.03
Smarcc2Q6PDG5 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcc2Q6PDG5 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.88□□□□□ -0.03
Smarcc2Q6PDG5 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC14.88□□□□□ -0.03
Smarcc2Q6PDG5 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Smarcc2Q6PDG5 Gm27514-201ENSMUST00000183692 110 ntBASIC14.88□□□□□ -0.03
Smarcc2Q6PDG5 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcc2Q6PDG5 Gm37042-201ENSMUST00000193816 581 ntBASIC14.88□□□□□ -0.03
Smarcc2Q6PDG5 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.88□□□□□ -0.03
Smarcc2Q6PDG5 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcc2Q6PDG5 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcc2Q6PDG5 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
Smarcc2Q6PDG5 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Smarcc2Q6PDG5 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcc2Q6PDG5 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Smarcc2Q6PDG5 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcc2Q6PDG5 Gm43858-201ENSMUST00000199418 1778 ntBASIC14.88□□□□□ -0.03
Smarcc2Q6PDG5 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcc2Q6PDG5 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcc2Q6PDG5 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smarcc2Q6PDG5 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcc2Q6PDG5 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.87□□□□□ -0.03
Smarcc2Q6PDG5 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Smarcc2Q6PDG5 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Smarcc2Q6PDG5 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcc2Q6PDG5 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcc2Q6PDG5 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcc2Q6PDG5 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcc2Q6PDG5 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC14.87□□□□□ -0.03
Smarcc2Q6PDG5 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcc2Q6PDG5 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcc2Q6PDG5 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Smarcc2Q6PDG5 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC14.87□□□□□ -0.03
Smarcc2Q6PDG5 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC14.87□□□□□ -0.03
Smarcc2Q6PDG5 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Smarcc2Q6PDG5 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC14.87□□□□□ -0.03
Smarcc2Q6PDG5 Gm13392-201ENSMUST00000117708 150 ntBASIC14.87□□□□□ -0.03
Smarcc2Q6PDG5 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.87□□□□□ -0.03
Smarcc2Q6PDG5 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcc2Q6PDG5 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC14.87□□□□□ -0.03
Smarcc2Q6PDG5 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcc2Q6PDG5 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcc2Q6PDG5 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcc2Q6PDG5 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC14.87□□□□□ -0.03
Smarcc2Q6PDG5 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcc2Q6PDG5 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcc2Q6PDG5 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcc2Q6PDG5 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcc2Q6PDG5 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcc2Q6PDG5 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcc2Q6PDG5 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.87□□□□□ -0.03
Smarcc2Q6PDG5 Gm5620-201ENSMUST00000077991 1348 ntBASIC14.87□□□□□ -0.03
Smarcc2Q6PDG5 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcc2Q6PDG5 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcc2Q6PDG5 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcc2Q6PDG5 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcc2Q6PDG5 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smarcc2Q6PDG5 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcc2Q6PDG5 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcc2Q6PDG5 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.86□□□□□ -0.03
Smarcc2Q6PDG5 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Smarcc2Q6PDG5 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcc2Q6PDG5 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcc2Q6PDG5 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcc2Q6PDG5 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Smarcc2Q6PDG5 Adra1a-206ENSMUST00000225182 2337 ntBASIC14.86□□□□□ -0.03
Smarcc2Q6PDG5 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcc2Q6PDG5 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcc2Q6PDG5 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Smarcc2Q6PDG5 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcc2Q6PDG5 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.86□□□□□ -0.03
Smarcc2Q6PDG5 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Smarcc2Q6PDG5 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Smarcc2Q6PDG5 Gm14921-201ENSMUST00000118643 908 ntBASIC14.86□□□□□ -0.03
Smarcc2Q6PDG5 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcc2Q6PDG5 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC14.86□□□□□ -0.03
Smarcc2Q6PDG5 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.86□□□□□ -0.03
Smarcc2Q6PDG5 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.86□□□□□ -0.03
Smarcc2Q6PDG5 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms