Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Krt39Q6IFX4 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Krt39Q6IFX4 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.09□□□□□ -0.15
Krt39Q6IFX4 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Krt39Q6IFX4 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Krt39Q6IFX4 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Krt39Q6IFX4 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Krt39Q6IFX4 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Krt39Q6IFX4 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Krt39Q6IFX4 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Krt39Q6IFX4 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.15
Krt39Q6IFX4 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Krt39Q6IFX4 Gm19817-201ENSMUST00000199764 2132 ntBASIC14.08□□□□□ -0.16
Krt39Q6IFX4 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Krt39Q6IFX4 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Krt39Q6IFX4 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Krt39Q6IFX4 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Krt39Q6IFX4 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Krt39Q6IFX4 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Krt39Q6IFX4 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Krt39Q6IFX4 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.08□□□□□ -0.16
Krt39Q6IFX4 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Krt39Q6IFX4 Gm12490-201ENSMUST00000120255 560 ntBASIC14.08□□□□□ -0.16
Krt39Q6IFX4 Gm12539-201ENSMUST00000121549 1098 ntBASIC14.08□□□□□ -0.16
Krt39Q6IFX4 Gm11918-201ENSMUST00000121660 179 ntBASIC14.08□□□□□ -0.16
Krt39Q6IFX4 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.08□□□□□ -0.16
Krt39Q6IFX4 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Krt39Q6IFX4 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.08□□□□□ -0.16
Krt39Q6IFX4 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.08□□□□□ -0.16
Krt39Q6IFX4 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Krt39Q6IFX4 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.08□□□□□ -0.16
Krt39Q6IFX4 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Krt39Q6IFX4 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Krt39Q6IFX4 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Krt39Q6IFX4 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Krt39Q6IFX4 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Krt39Q6IFX4 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.08□□□□□ -0.16
Krt39Q6IFX4 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Krt39Q6IFX4 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Krt39Q6IFX4 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt39Q6IFX4 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Krt39Q6IFX4 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt39Q6IFX4 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Krt39Q6IFX4 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt39Q6IFX4 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt39Q6IFX4 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Krt39Q6IFX4 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Krt39Q6IFX4 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC14.07□□□□□ -0.16
Krt39Q6IFX4 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Krt39Q6IFX4 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt39Q6IFX4 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Krt39Q6IFX4 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt39Q6IFX4 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC14.07□□□□□ -0.16
Krt39Q6IFX4 Gm43051-201ENSMUST00000201096 2678 ntBASIC14.07□□□□□ -0.16
Krt39Q6IFX4 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.07□□□□□ -0.16
Krt39Q6IFX4 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.07□□□□□ -0.16
Krt39Q6IFX4 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC14.07□□□□□ -0.16
Krt39Q6IFX4 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt39Q6IFX4 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt39Q6IFX4 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC14.07□□□□□ -0.16
Krt39Q6IFX4 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt39Q6IFX4 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt39Q6IFX4 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Krt39Q6IFX4 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt39Q6IFX4 Gm26035-201ENSMUST00000083065 308 ntBASIC14.07□□□□□ -0.16
Krt39Q6IFX4 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt39Q6IFX4 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt39Q6IFX4 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt39Q6IFX4 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt39Q6IFX4 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt39Q6IFX4 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt39Q6IFX4 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt39Q6IFX4 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Krt39Q6IFX4 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Krt39Q6IFX4 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt39Q6IFX4 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt39Q6IFX4 Gm1995-201ENSMUST00000220838 2602 ntBASIC14.07□□□□□ -0.16
Krt39Q6IFX4 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Krt39Q6IFX4 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC14.06□□□□□ -0.16
Krt39Q6IFX4 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt39Q6IFX4 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt39Q6IFX4 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt39Q6IFX4 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Krt39Q6IFX4 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC14.06□□□□□ -0.16
Krt39Q6IFX4 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt39Q6IFX4 AC164702.1-201ENSMUST00000220135 2212 ntBASIC14.06□□□□□ -0.16
Krt39Q6IFX4 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt39Q6IFX4 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.06□□□□□ -0.16
Krt39Q6IFX4 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt39Q6IFX4 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt39Q6IFX4 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt39Q6IFX4 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.06□□□□□ -0.16
Krt39Q6IFX4 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Krt39Q6IFX4 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt39Q6IFX4 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.06□□□□□ -0.16
Krt39Q6IFX4 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt39Q6IFX4 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.06□□□□□ -0.16
Krt39Q6IFX4 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.06□□□□□ -0.16
Krt39Q6IFX4 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.06□□□□□ -0.16
Krt39Q6IFX4 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms