Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sdc3Q64519 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sdc3Q64519 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Sdc3Q64519 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.3□□□□□ -0.44
Sdc3Q64519 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sdc3Q64519 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.3□□□□□ -0.44
Sdc3Q64519 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sdc3Q64519 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.3□□□□□ -0.44
Sdc3Q64519 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.3□□□□□ -0.44
Sdc3Q64519 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.3□□□□□ -0.44
Sdc3Q64519 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sdc3Q64519 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sdc3Q64519 Snora73a-201ENSMUST00000082453 205 ntBASIC12.3□□□□□ -0.44
Sdc3Q64519 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sdc3Q64519 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sdc3Q64519 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sdc3Q64519 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sdc3Q64519 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Sdc3Q64519 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Sdc3Q64519 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.3□□□□□ -0.44
Sdc3Q64519 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sdc3Q64519 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.3□□□□□ -0.44
Sdc3Q64519 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.3□□□□□ -0.44
Sdc3Q64519 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
Sdc3Q64519 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sdc3Q64519 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sdc3Q64519 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Sdc3Q64519 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sdc3Q64519 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sdc3Q64519 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sdc3Q64519 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sdc3Q64519 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sdc3Q64519 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Sdc3Q64519 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sdc3Q64519 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Sdc3Q64519 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Sdc3Q64519 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Sdc3Q64519 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.29□□□□□ -0.44
Sdc3Q64519 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sdc3Q64519 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sdc3Q64519 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sdc3Q64519 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sdc3Q64519 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sdc3Q64519 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sdc3Q64519 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sdc3Q64519 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.29□□□□□ -0.44
Sdc3Q64519 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sdc3Q64519 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sdc3Q64519 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sdc3Q64519 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.29□□□□□ -0.44
Sdc3Q64519 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.29□□□□□ -0.44
Sdc3Q64519 Gm11591-201ENSMUST00000120063 702 ntBASIC12.29□□□□□ -0.44
Sdc3Q64519 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Sdc3Q64519 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sdc3Q64519 Gm7809-201ENSMUST00000153199 742 ntBASIC12.29□□□□□ -0.44
Sdc3Q64519 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.29□□□□□ -0.44
Sdc3Q64519 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sdc3Q64519 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.29□□□□□ -0.44
Sdc3Q64519 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.29□□□□□ -0.44
Sdc3Q64519 Gm43133-201ENSMUST00000197472 463 ntBASIC12.29□□□□□ -0.44
Sdc3Q64519 Gm43179-201ENSMUST00000198797 275 ntBASIC12.29□□□□□ -0.44
Sdc3Q64519 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sdc3Q64519 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.29□□□□□ -0.44
Sdc3Q64519 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.29□□□□□ -0.44
Sdc3Q64519 Gm19309-201ENSMUST00000218295 205 ntBASIC12.29□□□□□ -0.44
Sdc3Q64519 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sdc3Q64519 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sdc3Q64519 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sdc3Q64519 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Sdc3Q64519 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sdc3Q64519 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sdc3Q64519 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sdc3Q64519 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sdc3Q64519 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Sdc3Q64519 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sdc3Q64519 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sdc3Q64519 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sdc3Q64519 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sdc3Q64519 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Sdc3Q64519 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sdc3Q64519 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sdc3Q64519 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sdc3Q64519 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sdc3Q64519 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sdc3Q64519 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Sdc3Q64519 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sdc3Q64519 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sdc3Q64519 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sdc3Q64519 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Sdc3Q64519 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sdc3Q64519 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sdc3Q64519 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Sdc3Q64519 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Sdc3Q64519 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sdc3Q64519 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sdc3Q64519 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.28□□□□□ -0.44
Sdc3Q64519 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.28□□□□□ -0.44
Sdc3Q64519 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sdc3Q64519 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.28□□□□□ -0.44
Sdc3Q64519 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms