Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.45□□□□□ -0.42
Vsx2Q61412 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.45□□□□□ -0.42
Vsx2Q61412 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vsx2Q61412 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Vsx2Q61412 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Vsx2Q61412 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Vsx2Q61412 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.45□□□□□ -0.42
Vsx2Q61412 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vsx2Q61412 Gm12384-201ENSMUST00000119228 919 ntBASIC12.45□□□□□ -0.42
Vsx2Q61412 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Vsx2Q61412 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.45□□□□□ -0.42
Vsx2Q61412 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vsx2Q61412 AY702102-202ENSMUST00000194651 1173 ntBASIC12.45□□□□□ -0.42
Vsx2Q61412 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vsx2Q61412 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vsx2Q61412 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vsx2Q61412 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vsx2Q61412 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Vsx2Q61412 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vsx2Q61412 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.45□□□□□ -0.42
Vsx2Q61412 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vsx2Q61412 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vsx2Q61412 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.45□□□□□ -0.42
Vsx2Q61412 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vsx2Q61412 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vsx2Q61412 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vsx2Q61412 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vsx2Q61412 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vsx2Q61412 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vsx2Q61412 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vsx2Q61412 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vsx2Q61412 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.44□□□□□ -0.42
Vsx2Q61412 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vsx2Q61412 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vsx2Q61412 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.44□□□□□ -0.42
Vsx2Q61412 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vsx2Q61412 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vsx2Q61412 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vsx2Q61412 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.44□□□□□ -0.42
Vsx2Q61412 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.44□□□□□ -0.42
Vsx2Q61412 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vsx2Q61412 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vsx2Q61412 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vsx2Q61412 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vsx2Q61412 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vsx2Q61412 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.44□□□□□ -0.42
Vsx2Q61412 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vsx2Q61412 Gm1335-201ENSMUST00000121653 386 ntBASIC12.44□□□□□ -0.42
Vsx2Q61412 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vsx2Q61412 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.44□□□□□ -0.42
Vsx2Q61412 Mir7221-201ENSMUST00000184009 72 ntBASIC12.44□□□□□ -0.42
Vsx2Q61412 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.44□□□□□ -0.42
Vsx2Q61412 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.44□□□□□ -0.42
Vsx2Q61412 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vsx2Q61412 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vsx2Q61412 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vsx2Q61412 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vsx2Q61412 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vsx2Q61412 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vsx2Q61412 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vsx2Q61412 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.44□□□□□ -0.42
Vsx2Q61412 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.44□□□□□ -0.42
Vsx2Q61412 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vsx2Q61412 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vsx2Q61412 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Vsx2Q61412 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vsx2Q61412 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Vsx2Q61412 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vsx2Q61412 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vsx2Q61412 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vsx2Q61412 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.43□□□□□ -0.42
Vsx2Q61412 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vsx2Q61412 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vsx2Q61412 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vsx2Q61412 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.43□□□□□ -0.42
Vsx2Q61412 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Vsx2Q61412 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.43□□□□□ -0.42
Vsx2Q61412 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.43□□□□□ -0.42
Vsx2Q61412 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.43□□□□□ -0.42
Vsx2Q61412 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.43□□□□□ -0.42
Vsx2Q61412 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vsx2Q61412 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.43□□□□□ -0.42
Vsx2Q61412 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vsx2Q61412 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Vsx2Q61412 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vsx2Q61412 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vsx2Q61412 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vsx2Q61412 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Vsx2Q61412 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vsx2Q61412 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.43□□□□□ -0.42
Vsx2Q61412 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.43□□□□□ -0.42
Vsx2Q61412 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vsx2Q61412 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vsx2Q61412 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vsx2Q61412 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vsx2Q61412 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Vsx2Q61412 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vsx2Q61412 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Vsx2Q61412 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Vsx2Q61412 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms