Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Prdm1Q60636 Gm13316-201ENSMUST00000140537 691 ntBASIC14.88□□□□□ -0.03
Prdm1Q60636 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC14.88□□□□□ -0.03
Prdm1Q60636 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prdm1Q60636 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Prdm1Q60636 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Prdm1Q60636 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Prdm1Q60636 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Prdm1Q60636 AC153937.1-201ENSMUST00000218734 412 ntBASIC14.88□□□□□ -0.03
Prdm1Q60636 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Prdm1Q60636 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Prdm1Q60636 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Prdm1Q60636 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prdm1Q60636 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC14.88□□□□□ -0.03
Prdm1Q60636 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Prdm1Q60636 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prdm1Q60636 Gm6203-201ENSMUST00000209575 1342 ntBASIC14.88□□□□□ -0.03
Prdm1Q60636 Gm3287-205ENSMUST00000228893 1332 ntBASIC14.88□□□□□ -0.03
Prdm1Q60636 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prdm1Q60636 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prdm1Q60636 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC14.88□□□□□ -0.03
Prdm1Q60636 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prdm1Q60636 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prdm1Q60636 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prdm1Q60636 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Prdm1Q60636 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prdm1Q60636 Gm3756-201ENSMUST00000169182 1355 ntBASIC14.87□□□□□ -0.03
Prdm1Q60636 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prdm1Q60636 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Prdm1Q60636 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Prdm1Q60636 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prdm1Q60636 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prdm1Q60636 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prdm1Q60636 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Prdm1Q60636 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Prdm1Q60636 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prdm1Q60636 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prdm1Q60636 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Prdm1Q60636 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.87□□□□□ -0.03
Prdm1Q60636 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Prdm1Q60636 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prdm1Q60636 Gm11793-201ENSMUST00000120433 981 ntBASIC14.87□□□□□ -0.03
Prdm1Q60636 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC14.87□□□□□ -0.03
Prdm1Q60636 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Prdm1Q60636 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC14.87□□□□□ -0.03
Prdm1Q60636 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Prdm1Q60636 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prdm1Q60636 Gm44974-201ENSMUST00000206387 1279 ntBASIC14.87□□□□□ -0.03
Prdm1Q60636 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC14.87□□□□□ -0.03
Prdm1Q60636 Gm5781-201ENSMUST00000219792 443 ntBASIC14.87□□□□□ -0.03
Prdm1Q60636 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC14.87□□□□□ -0.03
Prdm1Q60636 AC132317.1-201ENSMUST00000227227 962 ntBASIC14.87□□□□□ -0.03
Prdm1Q60636 AC167013.1-201ENSMUST00000228592 202 ntBASIC14.87□□□□□ -0.03
Prdm1Q60636 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prdm1Q60636 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prdm1Q60636 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Prdm1Q60636 Gm22058-201ENSMUST00000083393 310 ntBASIC14.87□□□□□ -0.03
Prdm1Q60636 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prdm1Q60636 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prdm1Q60636 Daam2-202ENSMUST00000224595 1926 ntBASIC14.87□□□□□ -0.03
Prdm1Q60636 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Prdm1Q60636 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prdm1Q60636 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prdm1Q60636 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Prdm1Q60636 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prdm1Q60636 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Prdm1Q60636 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Prdm1Q60636 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Prdm1Q60636 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Prdm1Q60636 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prdm1Q60636 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Prdm1Q60636 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC14.86□□□□□ -0.03
Prdm1Q60636 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Prdm1Q60636 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prdm1Q60636 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prdm1Q60636 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Prdm1Q60636 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Prdm1Q60636 Gm6210-201ENSMUST00000204734 1942 ntBASIC14.86□□□□□ -0.03
Prdm1Q60636 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prdm1Q60636 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prdm1Q60636 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prdm1Q60636 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prdm1Q60636 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Prdm1Q60636 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Prdm1Q60636 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Prdm1Q60636 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prdm1Q60636 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
Prdm1Q60636 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC14.86□□□□□ -0.03
Prdm1Q60636 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC14.86□□□□□ -0.03
Prdm1Q60636 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.86□□□□□ -0.03
Prdm1Q60636 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Prdm1Q60636 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Prdm1Q60636 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prdm1Q60636 Gm45930-201ENSMUST00000221330 292 ntBASIC14.86□□□□□ -0.03
Prdm1Q60636 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prdm1Q60636 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prdm1Q60636 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Prdm1Q60636 Gm9899-201ENSMUST00000065519 555 ntBASIC14.86□□□□□ -0.03
Prdm1Q60636 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prdm1Q60636 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms