Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Gm10829-201ENSMUST00000202084 2988 ntBASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Gm45828-201ENSMUST00000206938 1836 ntBASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Gm15467-201ENSMUST00000120582 445 ntBASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Gm3809-201ENSMUST00000180973 1006 ntBASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Gm43073-201ENSMUST00000198200 1189 ntBASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 AC166341.4-201ENSMUST00000220625 123 ntBASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 AC121598.1-201ENSMUST00000228224 1019 ntBASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 AC131710.1-201ENSMUST00000228336 990 ntBASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3-3Q5R1C3 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Gm44826-201ENSMUST00000207648 2332 ntBASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Gm25287-201ENSMUST00000103846 110 ntBASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Gm22918-201ENSMUST00000103855 110 ntBASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC9.55□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms