Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 Gm22920-201ENSMUST00000102175 109 ntBASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 Gm22594-201ENSMUST00000104251 130 ntBASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 Gm21759-201ENSMUST00000178345 1828 ntBASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps13aQ5H8C4 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vps13aQ5H8C4 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vps13aQ5H8C4 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.28□□□□□ -0.44
Vps13aQ5H8C4 Gm15566-201ENSMUST00000121130 590 ntBASIC12.28□□□□□ -0.44
Vps13aQ5H8C4 Gm6390-201ENSMUST00000215034 589 ntBASIC12.28□□□□□ -0.44
Vps13aQ5H8C4 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC12.28□□□□□ -0.44
Vps13aQ5H8C4 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.28□□□□□ -0.44
Vps13aQ5H8C4 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vps13aQ5H8C4 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.28□□□□□ -0.44
Vps13aQ5H8C4 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps13aQ5H8C4 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
Vps13aQ5H8C4 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vps13aQ5H8C4 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps13aQ5H8C4 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vps13aQ5H8C4 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vps13aQ5H8C4 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps13aQ5H8C4 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps13aQ5H8C4 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Vps13aQ5H8C4 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Vps13aQ5H8C4 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC12.28□□□□□ -0.44
Vps13aQ5H8C4 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vps13aQ5H8C4 Trav11n-201ENSMUST00000200113 343 ntBASIC12.28□□□□□ -0.44
Vps13aQ5H8C4 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps13aQ5H8C4 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps13aQ5H8C4 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps13aQ5H8C4 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.28□□□□□ -0.44
Vps13aQ5H8C4 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vps13aQ5H8C4 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Vps13aQ5H8C4 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Vps13aQ5H8C4 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.28□□□□□ -0.44
Vps13aQ5H8C4 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.28□□□□□ -0.44
Vps13aQ5H8C4 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.28□□□□□ -0.44
Vps13aQ5H8C4 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vps13aQ5H8C4 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Vps13aQ5H8C4 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Vps13aQ5H8C4 Lgi3-203ENSMUST00000226548 1001 ntBASIC12.28□□□□□ -0.44
Vps13aQ5H8C4 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps13aQ5H8C4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Vps13aQ5H8C4 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.28□□□□□ -0.44
Vps13aQ5H8C4 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps13aQ5H8C4 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Vps13aQ5H8C4 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vps13aQ5H8C4 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vps13aQ5H8C4 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vps13aQ5H8C4 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Vps13aQ5H8C4 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.27□□□□□ -0.44
Vps13aQ5H8C4 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.44
Vps13aQ5H8C4 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Vps13aQ5H8C4 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vps13aQ5H8C4 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vps13aQ5H8C4 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.27□□□□□ -0.44
Vps13aQ5H8C4 Gm18367-201ENSMUST00000176139 600 ntBASIC12.27□□□□□ -0.44
Vps13aQ5H8C4 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC12.27□□□□□ -0.44
Vps13aQ5H8C4 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Vps13aQ5H8C4 AC158388.3-202ENSMUST00000225517 775 ntBASIC12.27□□□□□ -0.44
Vps13aQ5H8C4 AC165154.1-201ENSMUST00000226661 340 ntBASIC12.27□□□□□ -0.44
Vps13aQ5H8C4 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vps13aQ5H8C4 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vps13aQ5H8C4 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vps13aQ5H8C4 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Vps13aQ5H8C4 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vps13aQ5H8C4 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vps13aQ5H8C4 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Vps13aQ5H8C4 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Vps13aQ5H8C4 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vps13aQ5H8C4 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vps13aQ5H8C4 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vps13aQ5H8C4 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms