Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf20Q5DTM8 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf20Q5DTM8 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf20Q5DTM8 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf20Q5DTM8 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rnf20Q5DTM8 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf20Q5DTM8 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rnf20Q5DTM8 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf20Q5DTM8 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf20Q5DTM8 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf20Q5DTM8 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf20Q5DTM8 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf20Q5DTM8 AC125108.1-201ENSMUST00000218986 2330 ntBASIC15.19■□□□□ 0.02
Rnf20Q5DTM8 Gm6992-201ENSMUST00000217973 1607 ntBASIC15.19■□□□□ 0.02
Rnf20Q5DTM8 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Rnf20Q5DTM8 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC15.19■□□□□ 0.02
Rnf20Q5DTM8 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC15.19■□□□□ 0.02
Rnf20Q5DTM8 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf20Q5DTM8 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC15.19■□□□□ 0.02
Rnf20Q5DTM8 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf20Q5DTM8 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf20Q5DTM8 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf20Q5DTM8 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf20Q5DTM8 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf20Q5DTM8 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf20Q5DTM8 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf20Q5DTM8 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf20Q5DTM8 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf20Q5DTM8 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf20Q5DTM8 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf20Q5DTM8 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf20Q5DTM8 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf20Q5DTM8 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC15.18■□□□□ 0.02
Rnf20Q5DTM8 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf20Q5DTM8 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf20Q5DTM8 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Rnf20Q5DTM8 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf20Q5DTM8 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC15.18■□□□□ 0.02
Rnf20Q5DTM8 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf20Q5DTM8 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf20Q5DTM8 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf20Q5DTM8 Snord83b-201ENSMUST00000104546 94 ntBASIC15.18■□□□□ 0.02
Rnf20Q5DTM8 Gm4984-201ENSMUST00000115987 360 ntBASIC15.18■□□□□ 0.02
Rnf20Q5DTM8 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC15.18■□□□□ 0.02
Rnf20Q5DTM8 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Rnf20Q5DTM8 Gm26927-201ENSMUST00000182385 965 ntBASIC15.18■□□□□ 0.02
Rnf20Q5DTM8 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Rnf20Q5DTM8 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC15.18■□□□□ 0.02
Rnf20Q5DTM8 Gm6652-201ENSMUST00000186414 1070 ntBASIC15.18■□□□□ 0.02
Rnf20Q5DTM8 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf20Q5DTM8 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Rnf20Q5DTM8 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf20Q5DTM8 Gm44775-201ENSMUST00000207266 1456 ntBASIC15.18■□□□□ 0.02
Rnf20Q5DTM8 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf20Q5DTM8 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf20Q5DTM8 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Rnf20Q5DTM8 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf20Q5DTM8 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf20Q5DTM8 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC15.18■□□□□ 0.02
Rnf20Q5DTM8 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf20Q5DTM8 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC15.18■□□□□ 0.02
Rnf20Q5DTM8 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC15.18■□□□□ 0.02
Rnf20Q5DTM8 Rnf17-202ENSMUST00000223627 2077 ntBASIC15.18■□□□□ 0.02
Rnf20Q5DTM8 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf20Q5DTM8 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf20Q5DTM8 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Rnf20Q5DTM8 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC15.18■□□□□ 0.02
Rnf20Q5DTM8 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf20Q5DTM8 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf20Q5DTM8 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf20Q5DTM8 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf20Q5DTM8 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf20Q5DTM8 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf20Q5DTM8 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf20Q5DTM8 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf20Q5DTM8 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Rnf20Q5DTM8 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf20Q5DTM8 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf20Q5DTM8 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf20Q5DTM8 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf20Q5DTM8 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Rnf20Q5DTM8 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Rnf20Q5DTM8 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf20Q5DTM8 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf20Q5DTM8 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC15.17■□□□□ 0.02
Rnf20Q5DTM8 Gm29127-201ENSMUST00000188304 517 ntBASIC15.17■□□□□ 0.02
Rnf20Q5DTM8 Gm38230-201ENSMUST00000193572 1159 ntBASIC15.17■□□□□ 0.02
Rnf20Q5DTM8 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf20Q5DTM8 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf20Q5DTM8 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf20Q5DTM8 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf20Q5DTM8 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Rnf20Q5DTM8 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf20Q5DTM8 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf20Q5DTM8 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf20Q5DTM8 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf20Q5DTM8 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf20Q5DTM8 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf20Q5DTM8 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf20Q5DTM8 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms