Protein–RNA interactions for Protein: Q3UHX8

Nkx6-3, Homeobox protein Nkx-6.3, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3Q3UHX8 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx6-3Q3UHX8 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.02□□□□□ -0.48
Nkx6-3Q3UHX8 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nkx6-3Q3UHX8 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nkx6-3Q3UHX8 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nkx6-3Q3UHX8 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.02□□□□□ -0.48
Nkx6-3Q3UHX8 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.02□□□□□ -0.48
Nkx6-3Q3UHX8 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nkx6-3Q3UHX8 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.02□□□□□ -0.48
Nkx6-3Q3UHX8 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nkx6-3Q3UHX8 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx6-3Q3UHX8 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx6-3Q3UHX8 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx6-3Q3UHX8 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx6-3Q3UHX8 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx6-3Q3UHX8 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx6-3Q3UHX8 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.49
Nkx6-3Q3UHX8 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.02□□□□□ -0.49
Nkx6-3Q3UHX8 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx6-3Q3UHX8 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Nkx6-3Q3UHX8 Gm38341-201ENSMUST00000195357 515 ntBASIC12.02□□□□□ -0.49
Nkx6-3Q3UHX8 Gm21769-201ENSMUST00000211922 111 ntBASIC12.02□□□□□ -0.49
Nkx6-3Q3UHX8 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.02□□□□□ -0.49
Nkx6-3Q3UHX8 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx6-3Q3UHX8 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx6-3Q3UHX8 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx6-3Q3UHX8 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.02□□□□□ -0.49
Nkx6-3Q3UHX8 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Nkx6-3Q3UHX8 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx6-3Q3UHX8 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx6-3Q3UHX8 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx6-3Q3UHX8 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx6-3Q3UHX8 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx6-3Q3UHX8 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx6-3Q3UHX8 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Nkx6-3Q3UHX8 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx6-3Q3UHX8 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.02□□□□□ -0.49
Nkx6-3Q3UHX8 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx6-3Q3UHX8 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx6-3Q3UHX8 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx6-3Q3UHX8 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx6-3Q3UHX8 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Gm25214-201ENSMUST00000104573 129 ntBASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Gm11531-201ENSMUST00000117614 555 ntBASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Gm13315-201ENSMUST00000120376 991 ntBASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Gm44364-201ENSMUST00000198368 141 ntBASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Gm7783-201ENSMUST00000204795 781 ntBASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Gm5950-201ENSMUST00000213337 772 ntBASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx6-3Q3UHX8 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms