Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp25Q3U435 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.01□□□□□ -0.49
Mmp25Q3U435 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp25Q3U435 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.01□□□□□ -0.49
Mmp25Q3U435 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp25Q3U435 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.01□□□□□ -0.49
Mmp25Q3U435 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.01□□□□□ -0.49
Mmp25Q3U435 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.01□□□□□ -0.49
Mmp25Q3U435 Gm7399-201ENSMUST00000032395 858 ntBASIC12.01□□□□□ -0.49
Mmp25Q3U435 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp25Q3U435 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp25Q3U435 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Mmp25Q3U435 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp25Q3U435 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp25Q3U435 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.01□□□□□ -0.49
Mmp25Q3U435 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.01□□□□□ -0.49
Mmp25Q3U435 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp25Q3U435 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Mmp25Q3U435 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp25Q3U435 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp25Q3U435 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp25Q3U435 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp25Q3U435 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp25Q3U435 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp25Q3U435 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Mmp25Q3U435 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Mmp25Q3U435 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Mmp25Q3U435 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Mmp25Q3U435 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12□□□□□ -0.49
Mmp25Q3U435 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Mmp25Q3U435 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Mmp25Q3U435 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Mmp25Q3U435 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Mmp25Q3U435 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Mmp25Q3U435 Gm10434-201ENSMUST00000101158 471 ntBASIC12□□□□□ -0.49
Mmp25Q3U435 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Mmp25Q3U435 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12□□□□□ -0.49
Mmp25Q3U435 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Mmp25Q3U435 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12□□□□□ -0.49
Mmp25Q3U435 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12□□□□□ -0.49
Mmp25Q3U435 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12□□□□□ -0.49
Mmp25Q3U435 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Mmp25Q3U435 Mospd4-201ENSMUST00000180618 576 ntBASIC12□□□□□ -0.49
Mmp25Q3U435 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Mmp25Q3U435 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12□□□□□ -0.49
Mmp25Q3U435 Gm44974-201ENSMUST00000206387 1279 ntBASIC12□□□□□ -0.49
Mmp25Q3U435 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12□□□□□ -0.49
Mmp25Q3U435 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Mmp25Q3U435 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Mmp25Q3U435 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Mmp25Q3U435 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Mmp25Q3U435 Gm6203-201ENSMUST00000209575 1342 ntBASIC12□□□□□ -0.49
Mmp25Q3U435 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12□□□□□ -0.49
Mmp25Q3U435 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Mmp25Q3U435 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12□□□□□ -0.49
Mmp25Q3U435 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12□□□□□ -0.49
Mmp25Q3U435 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Mmp25Q3U435 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Mmp25Q3U435 Gm37827-201ENSMUST00000194486 1542 ntBASIC12□□□□□ -0.49
Mmp25Q3U435 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12□□□□□ -0.49
Mmp25Q3U435 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Mmp25Q3U435 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Mmp25Q3U435 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Mmp25Q3U435 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp25Q3U435 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp25Q3U435 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp25Q3U435 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Mmp25Q3U435 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Mmp25Q3U435 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp25Q3U435 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp25Q3U435 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.99□□□□□ -0.49
Mmp25Q3U435 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp25Q3U435 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp25Q3U435 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp25Q3U435 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp25Q3U435 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp25Q3U435 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Mmp25Q3U435 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp25Q3U435 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Mmp25Q3U435 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Mmp25Q3U435 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.99□□□□□ -0.49
Mmp25Q3U435 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Mmp25Q3U435 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp25Q3U435 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Mmp25Q3U435 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp25Q3U435 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp25Q3U435 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp25Q3U435 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp25Q3U435 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp25Q3U435 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.99□□□□□ -0.49
Mmp25Q3U435 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.99□□□□□ -0.49
Mmp25Q3U435 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.99□□□□□ -0.49
Mmp25Q3U435 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp25Q3U435 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp25Q3U435 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp25Q3U435 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.99□□□□□ -0.49
Mmp25Q3U435 Gm45930-201ENSMUST00000221330 292 ntBASIC11.99□□□□□ -0.49
Mmp25Q3U435 Gm22058-201ENSMUST00000083393 310 ntBASIC11.99□□□□□ -0.49
Mmp25Q3U435 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp25Q3U435 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms