Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.55□□□□□ -0.56
Ccbe1Q3MI99 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccbe1Q3MI99 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ccbe1Q3MI99 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ccbe1Q3MI99 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Ccbe1Q3MI99 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Ccbe1Q3MI99 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccbe1Q3MI99 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC11.55□□□□□ -0.56
Ccbe1Q3MI99 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ccbe1Q3MI99 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ccbe1Q3MI99 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccbe1Q3MI99 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Ccbe1Q3MI99 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Gm11298-201ENSMUST00000120503 1799 ntBASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Gm9385-201ENSMUST00000117563 472 ntBASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Gm13365-201ENSMUST00000121188 973 ntBASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Gm44335-201ENSMUST00000196879 141 ntBASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Gm44297-201ENSMUST00000198304 141 ntBASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Gm44346-201ENSMUST00000198851 141 ntBASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 AC154572.2-201ENSMUST00000225105 997 ntBASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccbe1Q3MI99 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Ccbe1Q3MI99 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccbe1Q3MI99 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Ccbe1Q3MI99 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccbe1Q3MI99 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccbe1Q3MI99 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccbe1Q3MI99 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ccbe1Q3MI99 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Ccbe1Q3MI99 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ccbe1Q3MI99 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.53□□□□□ -0.56
Ccbe1Q3MI99 Upf3b-201ENSMUST00000076265 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccbe1Q3MI99 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ccbe1Q3MI99 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Ccbe1Q3MI99 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Ccbe1Q3MI99 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ccbe1Q3MI99 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccbe1Q3MI99 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccbe1Q3MI99 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccbe1Q3MI99 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccbe1Q3MI99 Gm37171-201ENSMUST00000192636 1185 ntBASIC11.53□□□□□ -0.56
Ccbe1Q3MI99 Thap2-203ENSMUST00000218989 527 ntBASIC11.53□□□□□ -0.56
Ccbe1Q3MI99 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.53□□□□□ -0.56
Ccbe1Q3MI99 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccbe1Q3MI99 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Ccbe1Q3MI99 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccbe1Q3MI99 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.53□□□□□ -0.56
Ccbe1Q3MI99 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccbe1Q3MI99 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ccbe1Q3MI99 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.53□□□□□ -0.56
Ccbe1Q3MI99 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccbe1Q3MI99 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccbe1Q3MI99 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.53□□□□□ -0.56
Ccbe1Q3MI99 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms