Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ptchd3Q0EEE2 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.31□□□□□ -0.44
Ptchd3Q0EEE2 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ptchd3Q0EEE2 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ptchd3Q0EEE2 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ptchd3Q0EEE2 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ptchd3Q0EEE2 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ptchd3Q0EEE2 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ptchd3Q0EEE2 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ptchd3Q0EEE2 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ptchd3Q0EEE2 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ptchd3Q0EEE2 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ptchd3Q0EEE2 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.31□□□□□ -0.44
Ptchd3Q0EEE2 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.31□□□□□ -0.44
Ptchd3Q0EEE2 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ptchd3Q0EEE2 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ptchd3Q0EEE2 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ptchd3Q0EEE2 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ptchd3Q0EEE2 Gm12341-201ENSMUST00000119724 503 ntBASIC12.31□□□□□ -0.44
Ptchd3Q0EEE2 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Ptchd3Q0EEE2 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.31□□□□□ -0.44
Ptchd3Q0EEE2 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Ptchd3Q0EEE2 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.31□□□□□ -0.44
Ptchd3Q0EEE2 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ptchd3Q0EEE2 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.31□□□□□ -0.44
Ptchd3Q0EEE2 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.31□□□□□ -0.44
Ptchd3Q0EEE2 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.31□□□□□ -0.44
Ptchd3Q0EEE2 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ptchd3Q0EEE2 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ptchd3Q0EEE2 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ptchd3Q0EEE2 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ptchd3Q0EEE2 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ptchd3Q0EEE2 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.31□□□□□ -0.44
Ptchd3Q0EEE2 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ptchd3Q0EEE2 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.31□□□□□ -0.44
Ptchd3Q0EEE2 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ptchd3Q0EEE2 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ptchd3Q0EEE2 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ptchd3Q0EEE2 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ptchd3Q0EEE2 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ptchd3Q0EEE2 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ptchd3Q0EEE2 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ptchd3Q0EEE2 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 Mir6392-201ENSMUST00000184924 108 ntBASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 Gm42550-201ENSMUST00000201553 960 ntBASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 Daam2-202ENSMUST00000224595 1926 ntBASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms