Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox4Q06831 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.55□□□□□ -0.4
Sox4Q06831 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox4Q06831 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Sox4Q06831 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.55□□□□□ -0.4
Sox4Q06831 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.55□□□□□ -0.4
Sox4Q06831 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.55□□□□□ -0.4
Sox4Q06831 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.55□□□□□ -0.4
Sox4Q06831 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox4Q06831 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox4Q06831 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Sox4Q06831 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Sox4Q06831 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sox4Q06831 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox4Q06831 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sox4Q06831 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox4Q06831 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox4Q06831 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox4Q06831 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.55□□□□□ -0.4
Sox4Q06831 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox4Q06831 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox4Q06831 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox4Q06831 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox4Q06831 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox4Q06831 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox4Q06831 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox4Q06831 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.55□□□□□ -0.4
Sox4Q06831 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox4Q06831 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox4Q06831 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox4Q06831 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sox4Q06831 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.54□□□□□ -0.4
Sox4Q06831 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox4Q06831 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox4Q06831 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox4Q06831 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox4Q06831 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox4Q06831 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sox4Q06831 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sox4Q06831 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox4Q06831 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Sox4Q06831 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.54□□□□□ -0.4
Sox4Q06831 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.54□□□□□ -0.4
Sox4Q06831 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.54□□□□□ -0.4
Sox4Q06831 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Sox4Q06831 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.54□□□□□ -0.4
Sox4Q06831 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox4Q06831 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.54□□□□□ -0.4
Sox4Q06831 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Sox4Q06831 Gm42627-201ENSMUST00000197347 224 ntBASIC12.54□□□□□ -0.4
Sox4Q06831 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sox4Q06831 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.54□□□□□ -0.4
Sox4Q06831 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.54□□□□□ -0.4
Sox4Q06831 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.54□□□□□ -0.4
Sox4Q06831 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.54□□□□□ -0.4
Sox4Q06831 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.54□□□□□ -0.4
Sox4Q06831 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sox4Q06831 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox4Q06831 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Sox4Q06831 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox4Q06831 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sox4Q06831 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sox4Q06831 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.54□□□□□ -0.4
Sox4Q06831 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sox4Q06831 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox4Q06831 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox4Q06831 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox4Q06831 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox4Q06831 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Sox4Q06831 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox4Q06831 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox4Q06831 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Sox4Q06831 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox4Q06831 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox4Q06831 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox4Q06831 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox4Q06831 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox4Q06831 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Sox4Q06831 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Sox4Q06831 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox4Q06831 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Sox4Q06831 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox4Q06831 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox4Q06831 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox4Q06831 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox4Q06831 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.53□□□□□ -0.4
Sox4Q06831 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox4Q06831 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox4Q06831 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Sox4Q06831 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox4Q06831 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox4Q06831 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox4Q06831 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Sox4Q06831 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox4Q06831 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Sox4Q06831 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox4Q06831 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.53□□□□□ -0.4
Sox4Q06831 Gm13492-201ENSMUST00000119772 665 ntBASIC12.53□□□□□ -0.4
Sox4Q06831 Gm24548-201ENSMUST00000158650 108 ntBASIC12.53□□□□□ -0.4
Sox4Q06831 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms