Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Col6a1Q04857 Gm13875-201ENSMUST00000120162 282 ntBASIC14.1□□□□□ -0.15
Col6a1Q04857 Gm11597-201ENSMUST00000121423 964 ntBASIC14.1□□□□□ -0.15
Col6a1Q04857 Gm8908-201ENSMUST00000121633 1024 ntBASIC14.1□□□□□ -0.15
Col6a1Q04857 Gm14665-201ENSMUST00000122294 557 ntBASIC14.1□□□□□ -0.15
Col6a1Q04857 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
Col6a1Q04857 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC14.1□□□□□ -0.15
Col6a1Q04857 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a1Q04857 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a1Q04857 Gm43058-201ENSMUST00000197645 625 ntBASIC14.1□□□□□ -0.15
Col6a1Q04857 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a1Q04857 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC14.1□□□□□ -0.15
Col6a1Q04857 Gm8712-201ENSMUST00000221090 701 ntBASIC14.1□□□□□ -0.15
Col6a1Q04857 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a1Q04857 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a1Q04857 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a1Q04857 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a1Q04857 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a1Q04857 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a1Q04857 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a1Q04857 Gm43081-201ENSMUST00000199082 1380 ntBASIC14.09□□□□□ -0.15
Col6a1Q04857 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.09□□□□□ -0.15
Col6a1Q04857 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a1Q04857 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a1Q04857 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a1Q04857 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a1Q04857 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a1Q04857 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a1Q04857 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Col6a1Q04857 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a1Q04857 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a1Q04857 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Col6a1Q04857 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC14.09□□□□□ -0.15
Col6a1Q04857 Gm42790-201ENSMUST00000201268 969 ntBASIC14.09□□□□□ -0.15
Col6a1Q04857 Gm44136-201ENSMUST00000203819 1106 ntBASIC14.09□□□□□ -0.15
Col6a1Q04857 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a1Q04857 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.09□□□□□ -0.15
Col6a1Q04857 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a1Q04857 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC14.09□□□□□ -0.15
Col6a1Q04857 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a1Q04857 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a1Q04857 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a1Q04857 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Col6a1Q04857 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a1Q04857 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a1Q04857 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a1Q04857 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a1Q04857 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a1Q04857 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Col6a1Q04857 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a1Q04857 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a1Q04857 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a1Q04857 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a1Q04857 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Col6a1Q04857 Gm9279-201ENSMUST00000223175 1606 ntBASIC14.08□□□□□ -0.15
Col6a1Q04857 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Col6a1Q04857 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Col6a1Q04857 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Col6a1Q04857 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a1Q04857 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.08□□□□□ -0.16
Col6a1Q04857 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a1Q04857 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a1Q04857 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a1Q04857 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a1Q04857 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Col6a1Q04857 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC14.08□□□□□ -0.16
Col6a1Q04857 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Col6a1Q04857 Gm22121-201ENSMUST00000175148 54 ntBASIC14.08□□□□□ -0.16
Col6a1Q04857 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Col6a1Q04857 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC14.08□□□□□ -0.16
Col6a1Q04857 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a1Q04857 Gm44551-201ENSMUST00000208804 171 ntBASIC14.08□□□□□ -0.16
Col6a1Q04857 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC14.08□□□□□ -0.16
Col6a1Q04857 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC14.08□□□□□ -0.16
Col6a1Q04857 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC14.08□□□□□ -0.16
Col6a1Q04857 AC140293.1-201ENSMUST00000225626 1247 ntBASIC14.08□□□□□ -0.16
Col6a1Q04857 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Col6a1Q04857 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a1Q04857 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a1Q04857 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a1Q04857 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a1Q04857 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.08□□□□□ -0.16
Col6a1Q04857 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a1Q04857 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Col6a1Q04857 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a1Q04857 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a1Q04857 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC14.08□□□□□ -0.16
Col6a1Q04857 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a1Q04857 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a1Q04857 Gm8228-201ENSMUST00000189949 2192 ntBASIC14.07□□□□□ -0.16
Col6a1Q04857 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Col6a1Q04857 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a1Q04857 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC14.07□□□□□ -0.16
Col6a1Q04857 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a1Q04857 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Col6a1Q04857 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a1Q04857 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Col6a1Q04857 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col6a1Q04857 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Col6a1Q04857 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms