Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn6Q03958 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn6Q03958 Gm11478-201ENSMUST00000117851 599 ntBASIC12.84□□□□□ -0.35
Pfdn6Q03958 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn6Q03958 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn6Q03958 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.84□□□□□ -0.35
Pfdn6Q03958 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.84□□□□□ -0.35
Pfdn6Q03958 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn6Q03958 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.84□□□□□ -0.35
Pfdn6Q03958 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.84□□□□□ -0.35
Pfdn6Q03958 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.84□□□□□ -0.35
Pfdn6Q03958 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn6Q03958 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Pfdn6Q03958 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn6Q03958 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn6Q03958 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn6Q03958 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.84□□□□□ -0.35
Pfdn6Q03958 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn6Q03958 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn6Q03958 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.84□□□□□ -0.35
Pfdn6Q03958 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn6Q03958 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn6Q03958 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.84□□□□□ -0.35
Pfdn6Q03958 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn6Q03958 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.84□□□□□ -0.35
Pfdn6Q03958 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn6Q03958 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn6Q03958 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Pfdn6Q03958 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Pfdn6Q03958 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn6Q03958 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn6Q03958 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn6Q03958 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn6Q03958 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn6Q03958 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn6Q03958 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.83□□□□□ -0.36
Pfdn6Q03958 Gm11637-201ENSMUST00000120601 592 ntBASIC12.83□□□□□ -0.36
Pfdn6Q03958 Gm12291-201ENSMUST00000121627 311 ntBASIC12.83□□□□□ -0.36
Pfdn6Q03958 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.83□□□□□ -0.36
Pfdn6Q03958 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn6Q03958 Gm26185-201ENSMUST00000157692 266 ntBASIC12.83□□□□□ -0.36
Pfdn6Q03958 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn6Q03958 Proscos-202ENSMUST00000178990 666 ntBASIC12.83□□□□□ -0.36
Pfdn6Q03958 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.83□□□□□ -0.36
Pfdn6Q03958 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.83□□□□□ -0.36
Pfdn6Q03958 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.83□□□□□ -0.36
Pfdn6Q03958 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn6Q03958 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn6Q03958 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Pfdn6Q03958 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Pfdn6Q03958 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn6Q03958 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn6Q03958 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn6Q03958 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn6Q03958 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn6Q03958 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Pfdn6Q03958 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn6Q03958 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn6Q03958 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn6Q03958 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Pfdn6Q03958 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn6Q03958 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn6Q03958 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn6Q03958 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn6Q03958 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn6Q03958 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Pfdn6Q03958 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.82□□□□□ -0.36
Pfdn6Q03958 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Pfdn6Q03958 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn6Q03958 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.82□□□□□ -0.36
Pfdn6Q03958 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn6Q03958 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn6Q03958 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.82□□□□□ -0.36
Pfdn6Q03958 Gm14921-201ENSMUST00000118643 908 ntBASIC12.82□□□□□ -0.36
Pfdn6Q03958 Gm12490-201ENSMUST00000120255 560 ntBASIC12.82□□□□□ -0.36
Pfdn6Q03958 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn6Q03958 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.82□□□□□ -0.36
Pfdn6Q03958 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.82□□□□□ -0.36
Pfdn6Q03958 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.82□□□□□ -0.36
Pfdn6Q03958 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.82□□□□□ -0.36
Pfdn6Q03958 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.82□□□□□ -0.36
Pfdn6Q03958 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.82□□□□□ -0.36
Pfdn6Q03958 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn6Q03958 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn6Q03958 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn6Q03958 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.82□□□□□ -0.36
Pfdn6Q03958 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn6Q03958 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn6Q03958 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn6Q03958 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn6Q03958 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn6Q03958 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn6Q03958 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.82□□□□□ -0.36
Pfdn6Q03958 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn6Q03958 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn6Q03958 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Pfdn6Q03958 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn6Q03958 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn6Q03958 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn6Q03958 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms