Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.09□□□□□ -0.47
Nkx3-2P97503 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx3-2P97503 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx3-2P97503 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.08□□□□□ -0.47
Nkx3-2P97503 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Nkx3-2P97503 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Nkx3-2P97503 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx3-2P97503 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Nkx3-2P97503 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.08□□□□□ -0.48
Nkx3-2P97503 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.08□□□□□ -0.48
Nkx3-2P97503 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx3-2P97503 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx3-2P97503 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx3-2P97503 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx3-2P97503 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Nkx3-2P97503 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx3-2P97503 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.08□□□□□ -0.48
Nkx3-2P97503 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx3-2P97503 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx3-2P97503 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx3-2P97503 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.08□□□□□ -0.48
Nkx3-2P97503 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.08□□□□□ -0.48
Nkx3-2P97503 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.08□□□□□ -0.48
Nkx3-2P97503 Gm7809-201ENSMUST00000153199 742 ntBASIC12.08□□□□□ -0.48
Nkx3-2P97503 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.08□□□□□ -0.48
Nkx3-2P97503 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.08□□□□□ -0.48
Nkx3-2P97503 Gm3890-201ENSMUST00000182416 207 ntBASIC12.08□□□□□ -0.48
Nkx3-2P97503 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.08□□□□□ -0.48
Nkx3-2P97503 Gm18935-201ENSMUST00000212692 664 ntBASIC12.08□□□□□ -0.48
Nkx3-2P97503 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.08□□□□□ -0.48
Nkx3-2P97503 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx3-2P97503 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx3-2P97503 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Nkx3-2P97503 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx3-2P97503 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx3-2P97503 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx3-2P97503 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Nkx3-2P97503 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx3-2P97503 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx3-2P97503 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx3-2P97503 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx3-2P97503 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx3-2P97503 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Nkx3-2P97503 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx3-2P97503 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx3-2P97503 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.08□□□□□ -0.48
Nkx3-2P97503 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx3-2P97503 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.08□□□□□ -0.48
Nkx3-2P97503 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.08□□□□□ -0.48
Nkx3-2P97503 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.08□□□□□ -0.48
Nkx3-2P97503 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx3-2P97503 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.08□□□□□ -0.48
Nkx3-2P97503 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx3-2P97503 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx3-2P97503 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Nkx3-2P97503 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.07□□□□□ -0.48
Nkx3-2P97503 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx3-2P97503 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx3-2P97503 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx3-2P97503 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Nkx3-2P97503 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx3-2P97503 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx3-2P97503 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.07□□□□□ -0.48
Nkx3-2P97503 Gm14723-201ENSMUST00000118686 215 ntBASIC12.07□□□□□ -0.48
Nkx3-2P97503 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx3-2P97503 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx3-2P97503 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.07□□□□□ -0.48
Nkx3-2P97503 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Nkx3-2P97503 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx3-2P97503 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx3-2P97503 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.07□□□□□ -0.48
Nkx3-2P97503 Gm6458-201ENSMUST00000211573 635 ntBASIC12.07□□□□□ -0.48
Nkx3-2P97503 Gm7046-201ENSMUST00000221351 977 ntBASIC12.07□□□□□ -0.48
Nkx3-2P97503 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx3-2P97503 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx3-2P97503 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx3-2P97503 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Nkx3-2P97503 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Nkx3-2P97503 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx3-2P97503 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx3-2P97503 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx3-2P97503 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx3-2P97503 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx3-2P97503 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx3-2P97503 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx3-2P97503 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx3-2P97503 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx3-2P97503 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx3-2P97503 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx3-2P97503 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx3-2P97503 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Nkx3-2P97503 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx3-2P97503 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx3-2P97503 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx3-2P97503 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.06□□□□□ -0.48
Nkx3-2P97503 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx3-2P97503 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx3-2P97503 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx3-2P97503 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nkx3-2P97503 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms