Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.97□□□□□ -0.17
Lig3P97386 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Lig3P97386 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lig3P97386 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Lig3P97386 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lig3P97386 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lig3P97386 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lig3P97386 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lig3P97386 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lig3P97386 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lig3P97386 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Lig3P97386 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Lig3P97386 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lig3P97386 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Lig3P97386 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.96□□□□□ -0.17
Lig3P97386 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lig3P97386 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.96□□□□□ -0.17
Lig3P97386 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lig3P97386 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.96□□□□□ -0.17
Lig3P97386 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC13.96□□□□□ -0.17
Lig3P97386 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.96□□□□□ -0.17
Lig3P97386 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lig3P97386 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lig3P97386 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lig3P97386 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lig3P97386 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Lig3P97386 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.96□□□□□ -0.17
Lig3P97386 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lig3P97386 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lig3P97386 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Lig3P97386 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.96□□□□□ -0.18
Lig3P97386 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
Lig3P97386 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lig3P97386 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.95□□□□□ -0.18
Lig3P97386 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Lig3P97386 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lig3P97386 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Lig3P97386 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lig3P97386 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lig3P97386 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lig3P97386 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.95□□□□□ -0.18
Lig3P97386 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lig3P97386 Gm13297-201ENSMUST00000120205 934 ntBASIC13.95□□□□□ -0.18
Lig3P97386 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.95□□□□□ -0.18
Lig3P97386 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.95□□□□□ -0.18
Lig3P97386 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Lig3P97386 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.95□□□□□ -0.18
Lig3P97386 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.95□□□□□ -0.18
Lig3P97386 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Lig3P97386 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.95□□□□□ -0.18
Lig3P97386 Gm37922-201ENSMUST00000195596 455 ntBASIC13.95□□□□□ -0.18
Lig3P97386 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.95□□□□□ -0.18
Lig3P97386 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lig3P97386 CT030182.1-201ENSMUST00000225935 533 ntBASIC13.95□□□□□ -0.18
Lig3P97386 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lig3P97386 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lig3P97386 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lig3P97386 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Lig3P97386 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lig3P97386 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Lig3P97386 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lig3P97386 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lig3P97386 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Lig3P97386 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.94□□□□□ -0.18
Lig3P97386 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Lig3P97386 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lig3P97386 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Lig3P97386 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Lig3P97386 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.94□□□□□ -0.18
Lig3P97386 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lig3P97386 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lig3P97386 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Lig3P97386 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Lig3P97386 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Lig3P97386 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lig3P97386 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.94□□□□□ -0.18
Lig3P97386 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Lig3P97386 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Lig3P97386 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.94□□□□□ -0.18
Lig3P97386 Gm7029-201ENSMUST00000173226 450 ntBASIC13.94□□□□□ -0.18
Lig3P97386 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Lig3P97386 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.94□□□□□ -0.18
Lig3P97386 Gm37489-201ENSMUST00000191883 159 ntBASIC13.94□□□□□ -0.18
Lig3P97386 Gm37986-201ENSMUST00000193285 383 ntBASIC13.94□□□□□ -0.18
Lig3P97386 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.94□□□□□ -0.18
Lig3P97386 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lig3P97386 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lig3P97386 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lig3P97386 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lig3P97386 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lig3P97386 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lig3P97386 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lig3P97386 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lig3P97386 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Lig3P97386 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lig3P97386 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lig3P97386 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Lig3P97386 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Lig3P97386 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lig3P97386 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms