Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
PrkdcP97313 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
PrkdcP97313 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC8.4□□□□□ -1.07
PrkdcP97313 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
PrkdcP97313 Gm7627-201ENSMUST00000183205 999 ntBASIC8.4□□□□□ -1.07
PrkdcP97313 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
PrkdcP97313 Mpzl1-203ENSMUST00000191818 853 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
PrkdcP97313 Gm10263-201ENSMUST00000085163 300 ntBASIC8.4□□□□□ -1.07
PrkdcP97313 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
PrkdcP97313 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
PrkdcP97313 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC8.4□□□□□ -1.07
PrkdcP97313 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
PrkdcP97313 Gm43807-201ENSMUST00000200678 1781 ntBASIC8.4□□□□□ -1.07
PrkdcP97313 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.07
PrkdcP97313 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.07
PrkdcP97313 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
PrkdcP97313 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
PrkdcP97313 Gm23612-201ENSMUST00000103823 110 ntBASIC8.39□□□□□ -1.07
PrkdcP97313 Mir1905-201ENSMUST00000122779 82 ntBASIC8.39□□□□□ -1.07
PrkdcP97313 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PrkdcP97313 Gm23576-201ENSMUST00000179918 110 ntBASIC8.39□□□□□ -1.07
PrkdcP97313 Gm29499-201ENSMUST00000189151 486 ntBASIC8.39□□□□□ -1.07
PrkdcP97313 Gm28329-201ENSMUST00000191208 689 ntBASIC8.39□□□□□ -1.07
PrkdcP97313 Gm29171-201ENSMUST00000191397 486 ntBASIC8.39□□□□□ -1.07
PrkdcP97313 Gm9884-201ENSMUST00000194343 1222 ntBASIC8.39□□□□□ -1.07
PrkdcP97313 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
PrkdcP97313 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC8.39□□□□□ -1.07
PrkdcP97313 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PrkdcP97313 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PrkdcP97313 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC8.39□□□□□ -1.07
PrkdcP97313 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PrkdcP97313 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PrkdcP97313 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PrkdcP97313 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PrkdcP97313 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PrkdcP97313 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PrkdcP97313 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PrkdcP97313 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
PrkdcP97313 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PrkdcP97313 Gm11957-201ENSMUST00000118304 779 ntBASIC8.39□□□□□ -1.07
PrkdcP97313 Gm12736-201ENSMUST00000119330 236 ntBASIC8.39□□□□□ -1.07
PrkdcP97313 Gm13117-201ENSMUST00000120894 691 ntBASIC8.39□□□□□ -1.07
PrkdcP97313 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC8.39□□□□□ -1.07
PrkdcP97313 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC8.39□□□□□ -1.07
PrkdcP97313 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PrkdcP97313 Gm44065-201ENSMUST00000203184 3527 ntBASIC8.39□□□□□ -1.07
PrkdcP97313 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
PrkdcP97313 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PrkdcP97313 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PrkdcP97313 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PrkdcP97313 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
PrkdcP97313 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PrkdcP97313 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PrkdcP97313 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PrkdcP97313 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PrkdcP97313 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PrkdcP97313 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
PrkdcP97313 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
PrkdcP97313 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC8.39□□□□□ -1.07
PrkdcP97313 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC8.39□□□□□ -1.07
PrkdcP97313 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC8.39□□□□□ -1.07
PrkdcP97313 Gm5419-201ENSMUST00000119301 527 ntBASIC8.39□□□□□ -1.07
PrkdcP97313 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC8.39□□□□□ -1.07
PrkdcP97313 AC154361.2-201ENSMUST00000224747 943 ntBASIC8.39□□□□□ -1.07
PrkdcP97313 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PrkdcP97313 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PrkdcP97313 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC8.39□□□□□ -1.07
PrkdcP97313 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC8.39□□□□□ -1.07
PrkdcP97313 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PrkdcP97313 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
PrkdcP97313 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PrkdcP97313 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PrkdcP97313 Gm43334-201ENSMUST00000197740 1318 ntBASIC8.39□□□□□ -1.07
PrkdcP97313 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PrkdcP97313 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC8.39□□□□□ -1.07
PrkdcP97313 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
PrkdcP97313 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PrkdcP97313 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PrkdcP97313 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
PrkdcP97313 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PrkdcP97313 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC8.39□□□□□ -1.07
PrkdcP97313 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC8.39□□□□□ -1.07
PrkdcP97313 Gm37981-201ENSMUST00000194280 535 ntBASIC8.39□□□□□ -1.07
PrkdcP97313 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PrkdcP97313 Gm5780-201ENSMUST00000217774 1834 ntBASIC8.38□□□□□ -1.07
PrkdcP97313 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
PrkdcP97313 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PrkdcP97313 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC8.38□□□□□ -1.07
PrkdcP97313 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PrkdcP97313 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
PrkdcP97313 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PrkdcP97313 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PrkdcP97313 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC8.38□□□□□ -1.07
PrkdcP97313 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC8.38□□□□□ -1.07
PrkdcP97313 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
PrkdcP97313 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
PrkdcP97313 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PrkdcP97313 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PrkdcP97313 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PrkdcP97313 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms