Protein–RNA interactions for Protein: P85442

Vgll3, Transcription cofactor vestigial-like protein 3, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vgll3P85442 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.05□□□□□ -0.32
Vgll3P85442 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vgll3P85442 AC159376.1-201ENSMUST00000218504 630 ntBASIC13.05□□□□□ -0.32
Vgll3P85442 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Vgll3P85442 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Vgll3P85442 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vgll3P85442 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vgll3P85442 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vgll3P85442 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vgll3P85442 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vgll3P85442 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vgll3P85442 Cfap61-204ENSMUST00000126415 2256 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vgll3P85442 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vgll3P85442 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Vgll3P85442 Src-205ENSMUST00000109533 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vgll3P85442 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vgll3P85442 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vgll3P85442 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vgll3P85442 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Vgll3P85442 Myo1a-201ENSMUST00000079590 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vgll3P85442 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vgll3P85442 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.04□□□□□ -0.32
Vgll3P85442 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vgll3P85442 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vgll3P85442 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC13.04□□□□□ -0.32
Vgll3P85442 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Vgll3P85442 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vgll3P85442 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vgll3P85442 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vgll3P85442 Ap1g1-206ENSMUST00000179104 1096 ntBASIC13.04□□□□□ -0.32
Vgll3P85442 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.04□□□□□ -0.32
Vgll3P85442 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vgll3P85442 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.04□□□□□ -0.32
Vgll3P85442 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vgll3P85442 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vgll3P85442 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vgll3P85442 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Vgll3P85442 Ano2-204ENSMUST00000160496 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vgll3P85442 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vgll3P85442 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vgll3P85442 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vgll3P85442 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vgll3P85442 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vgll3P85442 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vgll3P85442 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vgll3P85442 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vgll3P85442 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vgll3P85442 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vgll3P85442 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vgll3P85442 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.03□□□□□ -0.32
Vgll3P85442 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Vgll3P85442 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vgll3P85442 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vgll3P85442 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vgll3P85442 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Vgll3P85442 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vgll3P85442 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vgll3P85442 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vgll3P85442 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.03□□□□□ -0.32
Vgll3P85442 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vgll3P85442 Gm8584-201ENSMUST00000171982 758 ntBASIC13.03□□□□□ -0.32
Vgll3P85442 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vgll3P85442 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.03□□□□□ -0.32
Vgll3P85442 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vgll3P85442 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.03□□□□□ -0.32
Vgll3P85442 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
Vgll3P85442 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vgll3P85442 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vgll3P85442 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vgll3P85442 Rpl18-207ENSMUST00000210640 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vgll3P85442 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vgll3P85442 Ccdc116-202ENSMUST00000115709 1900 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vgll3P85442 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.03□□□□□ -0.32
Vgll3P85442 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vgll3P85442 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vgll3P85442 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vgll3P85442 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vgll3P85442 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vgll3P85442 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vgll3P85442 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vgll3P85442 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Vgll3P85442 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Vgll3P85442 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Vgll3P85442 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vgll3P85442 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vgll3P85442 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Vgll3P85442 Manba-201ENSMUST00000029814 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vgll3P85442 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vgll3P85442 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vgll3P85442 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Vgll3P85442 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Vgll3P85442 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vgll3P85442 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vgll3P85442 Copb1-201ENSMUST00000033012 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vgll3P85442 9230112E08Rik-202ENSMUST00000189441 3352 ntBASIC13.02□□□□□ -0.32
Vgll3P85442 Gm43288-201ENSMUST00000197594 2628 ntBASIC13.02□□□□□ -0.32
Vgll3P85442 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vgll3P85442 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Vgll3P85442 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vgll3P85442 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms