Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H3f3aP84244 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H3f3aP84244 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
H3f3aP84244 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
H3f3aP84244 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H3f3aP84244 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H3f3aP84244 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H3f3aP84244 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H3f3aP84244 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H3f3aP84244 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H3f3aP84244 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H3f3aP84244 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
H3f3aP84244 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H3f3aP84244 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H3f3aP84244 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H3f3aP84244 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
H3f3aP84244 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.36□□□□□ -0.59
H3f3aP84244 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H3f3aP84244 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
H3f3aP84244 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H3f3aP84244 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
H3f3aP84244 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
H3f3aP84244 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H3f3aP84244 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H3f3aP84244 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
H3f3aP84244 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
H3f3aP84244 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
H3f3aP84244 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H3f3aP84244 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
H3f3aP84244 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
H3f3aP84244 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
H3f3aP84244 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
H3f3aP84244 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.36□□□□□ -0.59
H3f3aP84244 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
H3f3aP84244 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
H3f3aP84244 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
H3f3aP84244 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.36□□□□□ -0.59
H3f3aP84244 Gm16296-201ENSMUST00000159905 325 ntBASIC11.36□□□□□ -0.59
H3f3aP84244 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
H3f3aP84244 Gm5370-201ENSMUST00000187187 574 ntBASIC11.36□□□□□ -0.59
H3f3aP84244 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.36□□□□□ -0.59
H3f3aP84244 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.36□□□□□ -0.59
H3f3aP84244 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
H3f3aP84244 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.36□□□□□ -0.59
H3f3aP84244 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
H3f3aP84244 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H3f3aP84244 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H3f3aP84244 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.36□□□□□ -0.59
H3f3aP84244 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
H3f3aP84244 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
H3f3aP84244 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H3f3aP84244 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H3f3aP84244 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
H3f3aP84244 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
H3f3aP84244 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.36□□□□□ -0.59
H3f3aP84244 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H3f3aP84244 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H3f3aP84244 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
H3f3aP84244 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H3f3aP84244 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
H3f3aP84244 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
H3f3aP84244 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.36□□□□□ -0.59
H3f3aP84244 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
H3f3aP84244 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H3f3aP84244 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
H3f3aP84244 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
H3f3aP84244 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.35□□□□□ -0.59
H3f3aP84244 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
H3f3aP84244 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
H3f3aP84244 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
H3f3aP84244 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.35□□□□□ -0.59
H3f3aP84244 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
H3f3aP84244 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H3f3aP84244 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
H3f3aP84244 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H3f3aP84244 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H3f3aP84244 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.35□□□□□ -0.59
H3f3aP84244 Gm7809-201ENSMUST00000153199 742 ntBASIC11.35□□□□□ -0.59
H3f3aP84244 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H3f3aP84244 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.35□□□□□ -0.59
H3f3aP84244 Gm19309-201ENSMUST00000218295 205 ntBASIC11.35□□□□□ -0.59
H3f3aP84244 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H3f3aP84244 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H3f3aP84244 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
H3f3aP84244 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
H3f3aP84244 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
H3f3aP84244 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.35□□□□□ -0.59
H3f3aP84244 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.35□□□□□ -0.59
H3f3aP84244 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
H3f3aP84244 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H3f3aP84244 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.35□□□□□ -0.59
H3f3aP84244 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
H3f3aP84244 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H3f3aP84244 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
H3f3aP84244 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H3f3aP84244 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H3f3aP84244 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.35□□□□□ -0.59
H3f3aP84244 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.35□□□□□ -0.59
H3f3aP84244 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.35□□□□□ -0.59
H3f3aP84244 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms