Protein–RNA interactions for Protein: P82976

Gbx1, Homeobox protein GBX-1, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gbx1P82976 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gbx1P82976 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Gbx1P82976 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gbx1P82976 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.98□□□□□ -0.49
Gbx1P82976 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gbx1P82976 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gbx1P82976 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Gbx1P82976 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Gbx1P82976 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gbx1P82976 Gm11803-201ENSMUST00000119966 444 ntBASIC11.98□□□□□ -0.49
Gbx1P82976 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Gbx1P82976 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Gbx1P82976 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gbx1P82976 Gm7063-201ENSMUST00000186840 981 ntBASIC11.98□□□□□ -0.49
Gbx1P82976 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.98□□□□□ -0.49
Gbx1P82976 Gm8515-201ENSMUST00000194852 576 ntBASIC11.98□□□□□ -0.49
Gbx1P82976 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.98□□□□□ -0.49
Gbx1P82976 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.98□□□□□ -0.49
Gbx1P82976 Gm9908-201ENSMUST00000211534 448 ntBASIC11.98□□□□□ -0.49
Gbx1P82976 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.98□□□□□ -0.49
Gbx1P82976 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Gbx1P82976 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gbx1P82976 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.98□□□□□ -0.49
Gbx1P82976 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.98□□□□□ -0.49
Gbx1P82976 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gbx1P82976 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gbx1P82976 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gbx1P82976 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gbx1P82976 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gbx1P82976 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Gbx1P82976 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gbx1P82976 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Gbx1P82976 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gbx1P82976 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gbx1P82976 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.98□□□□□ -0.49
Gbx1P82976 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gbx1P82976 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Gbx1P82976 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gbx1P82976 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gbx1P82976 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Gbx1P82976 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gbx1P82976 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gbx1P82976 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Gbx1P82976 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gbx1P82976 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gbx1P82976 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Gbx1P82976 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.97□□□□□ -0.49
Gbx1P82976 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gbx1P82976 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Gbx1P82976 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Gbx1P82976 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gbx1P82976 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.97□□□□□ -0.49
Gbx1P82976 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Gbx1P82976 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.97□□□□□ -0.49
Gbx1P82976 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gbx1P82976 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gbx1P82976 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.97□□□□□ -0.49
Gbx1P82976 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Gbx1P82976 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.97□□□□□ -0.49
Gbx1P82976 Gm8213-201ENSMUST00000118191 441 ntBASIC11.97□□□□□ -0.49
Gbx1P82976 Gm14704-201ENSMUST00000120300 874 ntBASIC11.97□□□□□ -0.49
Gbx1P82976 Gm8810-201ENSMUST00000172895 754 ntBASIC11.97□□□□□ -0.49
Gbx1P82976 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.97□□□□□ -0.49
Gbx1P82976 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.97□□□□□ -0.49
Gbx1P82976 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Gbx1P82976 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.97□□□□□ -0.49
Gbx1P82976 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Gbx1P82976 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Gbx1P82976 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gbx1P82976 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Gbx1P82976 Mir339-201ENSMUST00000083659 96 ntBASIC11.97□□□□□ -0.49
Gbx1P82976 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Gbx1P82976 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gbx1P82976 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Gbx1P82976 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Gbx1P82976 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gbx1P82976 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Gbx1P82976 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gbx1P82976 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Gbx1P82976 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.97□□□□□ -0.49
Gbx1P82976 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gbx1P82976 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gbx1P82976 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gbx1P82976 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Gbx1P82976 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gbx1P82976 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Gbx1P82976 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.96□□□□□ -0.49
Gbx1P82976 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gbx1P82976 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Gbx1P82976 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gbx1P82976 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Gbx1P82976 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
Gbx1P82976 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.96□□□□□ -0.49
Gbx1P82976 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.96□□□□□ -0.49
Gbx1P82976 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Gbx1P82976 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gbx1P82976 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gbx1P82976 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gbx1P82976 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gbx1P82976 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms