Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
SgcbP82349 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
SgcbP82349 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
SgcbP82349 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
SgcbP82349 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
SgcbP82349 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
SgcbP82349 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SgcbP82349 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.39□□□□□ -0.59
SgcbP82349 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.39□□□□□ -0.59
SgcbP82349 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgcbP82349 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgcbP82349 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.39□□□□□ -0.59
SgcbP82349 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.39□□□□□ -0.59
SgcbP82349 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SgcbP82349 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SgcbP82349 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
SgcbP82349 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
SgcbP82349 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgcbP82349 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.39□□□□□ -0.59
SgcbP82349 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.39□□□□□ -0.59
SgcbP82349 Gm13392-201ENSMUST00000117708 150 ntBASIC11.39□□□□□ -0.59
SgcbP82349 Gm12502-201ENSMUST00000120197 444 ntBASIC11.39□□□□□ -0.59
SgcbP82349 Gm12291-201ENSMUST00000121627 311 ntBASIC11.39□□□□□ -0.59
SgcbP82349 Mir1938-201ENSMUST00000158746 100 ntBASIC11.39□□□□□ -0.59
SgcbP82349 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.39□□□□□ -0.59
SgcbP82349 Gm22121-201ENSMUST00000175148 54 ntBASIC11.39□□□□□ -0.59
SgcbP82349 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.39□□□□□ -0.59
SgcbP82349 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgcbP82349 Gm5904-201ENSMUST00000210286 865 ntBASIC11.39□□□□□ -0.59
SgcbP82349 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.39□□□□□ -0.59
SgcbP82349 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgcbP82349 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgcbP82349 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.39□□□□□ -0.59
SgcbP82349 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgcbP82349 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SgcbP82349 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
SgcbP82349 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.39□□□□□ -0.59
SgcbP82349 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgcbP82349 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
SgcbP82349 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
SgcbP82349 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SgcbP82349 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgcbP82349 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgcbP82349 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgcbP82349 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgcbP82349 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgcbP82349 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
SgcbP82349 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
SgcbP82349 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.39□□□□□ -0.59
SgcbP82349 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
SgcbP82349 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.39□□□□□ -0.59
SgcbP82349 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SgcbP82349 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.39□□□□□ -0.59
SgcbP82349 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.38□□□□□ -0.59
SgcbP82349 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.38□□□□□ -0.59
SgcbP82349 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcbP82349 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcbP82349 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcbP82349 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SgcbP82349 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcbP82349 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcbP82349 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcbP82349 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcbP82349 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.38□□□□□ -0.59
SgcbP82349 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SgcbP82349 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcbP82349 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.38□□□□□ -0.59
SgcbP82349 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcbP82349 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.38□□□□□ -0.59
SgcbP82349 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.38□□□□□ -0.59
SgcbP82349 Gm25261-201ENSMUST00000157416 134 ntBASIC11.38□□□□□ -0.59
SgcbP82349 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcbP82349 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SgcbP82349 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
SgcbP82349 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SgcbP82349 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.38□□□□□ -0.59
SgcbP82349 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.38□□□□□ -0.59
SgcbP82349 Gm42627-201ENSMUST00000197347 224 ntBASIC11.38□□□□□ -0.59
SgcbP82349 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.38□□□□□ -0.59
SgcbP82349 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.38□□□□□ -0.59
SgcbP82349 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcbP82349 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
SgcbP82349 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcbP82349 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcbP82349 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcbP82349 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcbP82349 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.38□□□□□ -0.59
SgcbP82349 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
SgcbP82349 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcbP82349 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SgcbP82349 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.38□□□□□ -0.59
SgcbP82349 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcbP82349 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcbP82349 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.38□□□□□ -0.59
SgcbP82349 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcbP82349 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcbP82349 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcbP82349 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcbP82349 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SgcbP82349 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms