Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Gm2420-201ENSMUST00000119864 2149 ntBASIC9.08□□□□□ -0.96
Rpl39P62892 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Rpl39P62892 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39P62892 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC9.08□□□□□ -0.96
Rpl39P62892 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39P62892 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39P62892 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39P62892 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39P62892 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Rpl39P62892 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC9.08□□□□□ -0.96
Rpl39P62892 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Rpl39P62892 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Rpl39P62892 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39P62892 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39P62892 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39P62892 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39P62892 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC9.08□□□□□ -0.96
Rpl39P62892 Gm6447-201ENSMUST00000118905 835 ntBASIC9.08□□□□□ -0.96
Rpl39P62892 Gm11400-201ENSMUST00000120853 1214 ntBASIC9.08□□□□□ -0.96
Rpl39P62892 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39P62892 Gm37277-201ENSMUST00000194052 1111 ntBASIC9.08□□□□□ -0.96
Rpl39P62892 Gm5312-201ENSMUST00000203728 547 ntBASIC9.08□□□□□ -0.96
Rpl39P62892 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC9.08□□□□□ -0.96
Rpl39P62892 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39P62892 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39P62892 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39P62892 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39P62892 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39P62892 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39P62892 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Rpl39P62892 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39P62892 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39P62892 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Rpl39P62892 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39P62892 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39P62892 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39P62892 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39P62892 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Rpl39P62892 AC156031.2-201ENSMUST00000213107 3310 ntBASIC9.08□□□□□ -0.96
Rpl39P62892 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC9.08□□□□□ -0.96
Rpl39P62892 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Rpl39P62892 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Rpl39P62892 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC9.08□□□□□ -0.96
Rpl39P62892 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rpl39P62892 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Rpl39P62892 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC9.07□□□□□ -0.96
Rpl39P62892 AC154767.3-201ENSMUST00000225150 1342 ntBASIC9.07□□□□□ -0.96
Rpl39P62892 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rpl39P62892 Gm5053-201ENSMUST00000208361 1678 ntBASIC9.07□□□□□ -0.96
Rpl39P62892 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Rpl39P62892 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rpl39P62892 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Rpl39P62892 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rpl39P62892 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rpl39P62892 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rpl39P62892 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rpl39P62892 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rpl39P62892 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Rpl39P62892 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC9.07□□□□□ -0.96
Rpl39P62892 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rpl39P62892 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Rpl39P62892 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC9.07□□□□□ -0.96
Rpl39P62892 Gm43061-201ENSMUST00000198850 2241 ntBASIC9.07□□□□□ -0.96
Rpl39P62892 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rpl39P62892 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rpl39P62892 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rpl39P62892 Gm9279-201ENSMUST00000223175 1606 ntBASIC9.07□□□□□ -0.96
Rpl39P62892 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rpl39P62892 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rpl39P62892 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Rpl39P62892 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rpl39P62892 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Rpl39P62892 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC9.07□□□□□ -0.96
Rpl39P62892 Gm4875-201ENSMUST00000118257 786 ntBASIC9.07□□□□□ -0.96
Rpl39P62892 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
Rpl39P62892 Gm14767-201ENSMUST00000121559 586 ntBASIC9.07□□□□□ -0.96
Rpl39P62892 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC9.07□□□□□ -0.96
Rpl39P62892 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC9.07□□□□□ -0.96
Rpl39P62892 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC9.07□□□□□ -0.96
Rpl39P62892 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Rpl39P62892 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC9.07□□□□□ -0.96
Rpl39P62892 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
Rpl39P62892 Gm27321-201ENSMUST00000185021 205 ntBASIC9.07□□□□□ -0.96
Rpl39P62892 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC9.07□□□□□ -0.96
Rpl39P62892 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC9.07□□□□□ -0.96
Rpl39P62892 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Rpl39P62892 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rpl39P62892 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC9.07□□□□□ -0.96
Rpl39P62892 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC9.07□□□□□ -0.96
Rpl39P62892 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rpl39P62892 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rpl39P62892 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC9.07□□□□□ -0.96
Rpl39P62892 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rpl39P62892 Gm5780-201ENSMUST00000217774 1834 ntBASIC9.07□□□□□ -0.96
Rpl39P62892 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rpl39P62892 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Rpl39P62892 Gm37437-201ENSMUST00000194451 1937 ntBASIC9.07□□□□□ -0.96
Rpl39P62892 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rpl39P62892 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC9.07□□□□□ -0.96
Rpl39P62892 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC9.07□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms