Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm6P62313 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Lsm6P62313 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.21□□□□□ -0.61
Lsm6P62313 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm6P62313 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm6P62313 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm6P62313 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm6P62313 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm6P62313 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm6P62313 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm6P62313 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm6P62313 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.21□□□□□ -0.61
Lsm6P62313 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm6P62313 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm6P62313 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.21□□□□□ -0.61
Lsm6P62313 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm6P62313 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.21□□□□□ -0.61
Lsm6P62313 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm6P62313 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm6P62313 Gm6091-201ENSMUST00000098307 165 ntBASIC11.21□□□□□ -0.61
Lsm6P62313 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm6P62313 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Lsm6P62313 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm6P62313 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm6P62313 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lsm6P62313 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Lsm6P62313 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lsm6P62313 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lsm6P62313 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.21□□□□□ -0.62
Lsm6P62313 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lsm6P62313 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lsm6P62313 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lsm6P62313 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lsm6P62313 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lsm6P62313 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm6P62313 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm6P62313 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm6P62313 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm6P62313 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm6P62313 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm6P62313 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm6P62313 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm6P62313 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm6P62313 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.2□□□□□ -0.62
Lsm6P62313 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm6P62313 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.2□□□□□ -0.62
Lsm6P62313 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm6P62313 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm6P62313 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm6P62313 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm6P62313 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm6P62313 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm6P62313 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.2□□□□□ -0.62
Lsm6P62313 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm6P62313 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm6P62313 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm6P62313 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.2□□□□□ -0.62
Lsm6P62313 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.2□□□□□ -0.62
Lsm6P62313 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.2□□□□□ -0.62
Lsm6P62313 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Lsm6P62313 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.2□□□□□ -0.62
Lsm6P62313 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.2□□□□□ -0.62
Lsm6P62313 Gm19163-201ENSMUST00000223313 780 ntBASIC11.2□□□□□ -0.62
Lsm6P62313 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm6P62313 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Lsm6P62313 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm6P62313 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm6P62313 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm6P62313 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm6P62313 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Lsm6P62313 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm6P62313 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm6P62313 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.2□□□□□ -0.62
Lsm6P62313 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm6P62313 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm6P62313 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm6P62313 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm6P62313 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm6P62313 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.19□□□□□ -0.62
Lsm6P62313 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm6P62313 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm6P62313 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm6P62313 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Lsm6P62313 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm6P62313 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.19□□□□□ -0.62
Lsm6P62313 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm6P62313 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Lsm6P62313 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm6P62313 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm6P62313 Snord83b-201ENSMUST00000104546 94 ntBASIC11.19□□□□□ -0.62
Lsm6P62313 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm6P62313 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.19□□□□□ -0.62
Lsm6P62313 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.19□□□□□ -0.62
Lsm6P62313 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.19□□□□□ -0.62
Lsm6P62313 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm6P62313 Gm26927-201ENSMUST00000182385 965 ntBASIC11.19□□□□□ -0.62
Lsm6P62313 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.19□□□□□ -0.62
Lsm6P62313 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.19□□□□□ -0.62
Lsm6P62313 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Lsm6P62313 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms