Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gm14127-201ENSMUST00000117906 678 ntBASIC11.26□□□□□ -0.61
Sec61a1P61620 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a1P61620 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.26□□□□□ -0.61
Sec61a1P61620 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a1P61620 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Sec61a1P61620 Gm15429-201ENSMUST00000151268 798 ntBASIC11.26□□□□□ -0.61
Sec61a1P61620 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Sec61a1P61620 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Sec61a1P61620 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a1P61620 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Sec61a1P61620 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a1P61620 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a1P61620 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.26□□□□□ -0.61
Sec61a1P61620 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a1P61620 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.26□□□□□ -0.61
Sec61a1P61620 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.26□□□□□ -0.61
Sec61a1P61620 Gm5035-201ENSMUST00000215581 927 ntBASIC11.26□□□□□ -0.61
Sec61a1P61620 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.26□□□□□ -0.61
Sec61a1P61620 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.26□□□□□ -0.61
Sec61a1P61620 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Sec61a1P61620 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Sec61a1P61620 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a1P61620 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a1P61620 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a1P61620 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a1P61620 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a1P61620 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a1P61620 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a1P61620 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a1P61620 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a1P61620 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a1P61620 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a1P61620 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a1P61620 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a1P61620 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a1P61620 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.26□□□□□ -0.61
Sec61a1P61620 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sec61a1P61620 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.26□□□□□ -0.61
Sec61a1P61620 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Sec61a1P61620 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.25□□□□□ -0.61
Sec61a1P61620 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a1P61620 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Sec61a1P61620 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a1P61620 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a1P61620 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a1P61620 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a1P61620 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a1P61620 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a1P61620 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a1P61620 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a1P61620 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a1P61620 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Sec61a1P61620 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Sec61a1P61620 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a1P61620 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a1P61620 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.25□□□□□ -0.61
Sec61a1P61620 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a1P61620 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a1P61620 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.25□□□□□ -0.61
Sec61a1P61620 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.25□□□□□ -0.61
Sec61a1P61620 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.25□□□□□ -0.61
Sec61a1P61620 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a1P61620 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a1P61620 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a1P61620 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Sec61a1P61620 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.25□□□□□ -0.61
Sec61a1P61620 Gm2495-201ENSMUST00000191160 466 ntBASIC11.25□□□□□ -0.61
Sec61a1P61620 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Sec61a1P61620 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.25□□□□□ -0.61
Sec61a1P61620 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a1P61620 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a1P61620 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a1P61620 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a1P61620 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a1P61620 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a1P61620 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.25□□□□□ -0.61
Sec61a1P61620 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.25□□□□□ -0.61
Sec61a1P61620 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.25□□□□□ -0.61
Sec61a1P61620 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a1P61620 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a1P61620 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.25□□□□□ -0.61
Sec61a1P61620 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a1P61620 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a1P61620 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.25□□□□□ -0.61
Sec61a1P61620 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Sec61a1P61620 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Sec61a1P61620 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sec61a1P61620 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Sec61a1P61620 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a1P61620 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a1P61620 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a1P61620 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a1P61620 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a1P61620 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a1P61620 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a1P61620 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a1P61620 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Sec61a1P61620 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a1P61620 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a1P61620 Gm9002-201ENSMUST00000178437 499 ntBASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms