Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sf3b6P59708 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Sf3b6P59708 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3b6P59708 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Sf3b6P59708 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3b6P59708 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3b6P59708 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3b6P59708 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3b6P59708 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3b6P59708 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3b6P59708 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3b6P59708 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3b6P59708 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3b6P59708 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3b6P59708 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.32□□□□□ -0.6
Sf3b6P59708 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3b6P59708 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Sf3b6P59708 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3b6P59708 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Sf3b6P59708 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3b6P59708 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.32□□□□□ -0.6
Sf3b6P59708 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.32□□□□□ -0.6
Sf3b6P59708 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.32□□□□□ -0.6
Sf3b6P59708 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.32□□□□□ -0.6
Sf3b6P59708 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.32□□□□□ -0.6
Sf3b6P59708 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3b6P59708 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3b6P59708 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Sf3b6P59708 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3b6P59708 Gm9797-201ENSMUST00000052902 613 ntBASIC11.32□□□□□ -0.6
Sf3b6P59708 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3b6P59708 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3b6P59708 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3b6P59708 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3b6P59708 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3b6P59708 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3b6P59708 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3b6P59708 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3b6P59708 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.32□□□□□ -0.6
Sf3b6P59708 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3b6P59708 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Sf3b6P59708 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3b6P59708 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.32□□□□□ -0.6
Sf3b6P59708 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3b6P59708 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sf3b6P59708 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Sf3b6P59708 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3b6P59708 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Sf3b6P59708 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3b6P59708 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Sf3b6P59708 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3b6P59708 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3b6P59708 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3b6P59708 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3b6P59708 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.31□□□□□ -0.6
Sf3b6P59708 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.31□□□□□ -0.6
Sf3b6P59708 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3b6P59708 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3b6P59708 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3b6P59708 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.31□□□□□ -0.6
Sf3b6P59708 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3b6P59708 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3b6P59708 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3b6P59708 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3b6P59708 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.31□□□□□ -0.6
Sf3b6P59708 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3b6P59708 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3b6P59708 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Sf3b6P59708 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC11.31□□□□□ -0.6
Sf3b6P59708 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.31□□□□□ -0.6
Sf3b6P59708 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.31□□□□□ -0.6
Sf3b6P59708 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.31□□□□□ -0.6
Sf3b6P59708 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3b6P59708 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.31□□□□□ -0.6
Sf3b6P59708 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.31□□□□□ -0.6
Sf3b6P59708 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.31□□□□□ -0.6
Sf3b6P59708 Gm8227-201ENSMUST00000223306 571 ntBASIC11.31□□□□□ -0.6
Sf3b6P59708 Wdyhv1-206ENSMUST00000227142 786 ntBASIC11.31□□□□□ -0.6
Sf3b6P59708 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Sf3b6P59708 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3b6P59708 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3b6P59708 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3b6P59708 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3b6P59708 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Sf3b6P59708 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3b6P59708 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3b6P59708 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3b6P59708 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3b6P59708 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3b6P59708 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3b6P59708 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Sf3b6P59708 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3b6P59708 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3b6P59708 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Sf3b6P59708 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3b6P59708 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Sf3b6P59708 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.31□□□□□ -0.6
Sf3b6P59708 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Sf3b6P59708 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sf3b6P59708 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms