Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Sssca1P56873 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sssca1P56873 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Sssca1P56873 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC10.31□□□□□ -0.76
Sssca1P56873 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sssca1P56873 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sssca1P56873 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.31□□□□□ -0.76
Sssca1P56873 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sssca1P56873 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sssca1P56873 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sssca1P56873 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sssca1P56873 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sssca1P56873 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Sssca1P56873 Gm43677-201ENSMUST00000198098 2378 ntBASIC10.31□□□□□ -0.76
Sssca1P56873 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC10.31□□□□□ -0.76
Sssca1P56873 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sssca1P56873 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
Sssca1P56873 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sssca1P56873 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sssca1P56873 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Sssca1P56873 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sssca1P56873 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.3□□□□□ -0.76
Sssca1P56873 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.3□□□□□ -0.76
Sssca1P56873 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sssca1P56873 Gm44942-201ENSMUST00000096093 2072 ntBASIC10.3□□□□□ -0.76
Sssca1P56873 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sssca1P56873 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC10.3□□□□□ -0.76
Sssca1P56873 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.3□□□□□ -0.76
Sssca1P56873 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sssca1P56873 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sssca1P56873 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sssca1P56873 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sssca1P56873 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sssca1P56873 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sssca1P56873 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Sssca1P56873 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sssca1P56873 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sssca1P56873 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.3□□□□□ -0.76
Sssca1P56873 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sssca1P56873 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC10.3□□□□□ -0.76
Sssca1P56873 Gm15487-201ENSMUST00000122373 465 ntBASIC10.3□□□□□ -0.76
Sssca1P56873 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sssca1P56873 Gm5354-201ENSMUST00000182417 973 ntBASIC10.3□□□□□ -0.76
Sssca1P56873 Gm31326-201ENSMUST00000191856 1048 ntBASIC10.3□□□□□ -0.76
Sssca1P56873 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC10.3□□□□□ -0.76
Sssca1P56873 Gm6458-201ENSMUST00000211573 635 ntBASIC10.3□□□□□ -0.76
Sssca1P56873 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sssca1P56873 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sssca1P56873 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sssca1P56873 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sssca1P56873 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sssca1P56873 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sssca1P56873 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sssca1P56873 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sssca1P56873 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sssca1P56873 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sssca1P56873 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sssca1P56873 Gm44758-201ENSMUST00000206096 2068 ntBASIC10.3□□□□□ -0.76
Sssca1P56873 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sssca1P56873 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sssca1P56873 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Sssca1P56873 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sssca1P56873 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sssca1P56873 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sssca1P56873 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sssca1P56873 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sssca1P56873 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Sssca1P56873 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Sssca1P56873 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Sssca1P56873 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Sssca1P56873 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sssca1P56873 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sssca1P56873 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.29□□□□□ -0.76
Sssca1P56873 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sssca1P56873 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sssca1P56873 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sssca1P56873 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sssca1P56873 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sssca1P56873 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sssca1P56873 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sssca1P56873 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sssca1P56873 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Sssca1P56873 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sssca1P56873 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sssca1P56873 Mir686-201ENSMUST00000102174 109 ntBASIC10.29□□□□□ -0.76
Sssca1P56873 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Sssca1P56873 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sssca1P56873 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sssca1P56873 Gm5303-201ENSMUST00000117943 1252 ntBASIC10.29□□□□□ -0.76
Sssca1P56873 Gm11978-201ENSMUST00000122315 466 ntBASIC10.29□□□□□ -0.76
Sssca1P56873 Gm16342-201ENSMUST00000124025 1025 ntBASIC10.29□□□□□ -0.76
Sssca1P56873 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC10.29□□□□□ -0.76
Sssca1P56873 Mir7684-201ENSMUST00000183858 60 ntBASIC10.29□□□□□ -0.76
Sssca1P56873 Mir8102-201ENSMUST00000184148 139 ntBASIC10.29□□□□□ -0.76
Sssca1P56873 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC10.29□□□□□ -0.76
Sssca1P56873 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sssca1P56873 Hist1h2al-201ENSMUST00000091708 339 ntBASIC10.29□□□□□ -0.76
Sssca1P56873 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sssca1P56873 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sssca1P56873 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.29□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms