Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Lim2P56563 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lim2P56563 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lim2P56563 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lim2P56563 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lim2P56563 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.76□□□□□ -0.37
Lim2P56563 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lim2P56563 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lim2P56563 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lim2P56563 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lim2P56563 Gm12291-201ENSMUST00000121627 311 ntBASIC12.75□□□□□ -0.37
Lim2P56563 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.75□□□□□ -0.37
Lim2P56563 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lim2P56563 Gm7809-201ENSMUST00000153199 742 ntBASIC12.75□□□□□ -0.37
Lim2P56563 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.75□□□□□ -0.37
Lim2P56563 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lim2P56563 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.75□□□□□ -0.37
Lim2P56563 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lim2P56563 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Lim2P56563 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Lim2P56563 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.75□□□□□ -0.37
Lim2P56563 Gm8099-201ENSMUST00000200510 742 ntBASIC12.75□□□□□ -0.37
Lim2P56563 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.75□□□□□ -0.37
Lim2P56563 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.75□□□□□ -0.37
Lim2P56563 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lim2P56563 Gm19309-201ENSMUST00000218295 205 ntBASIC12.75□□□□□ -0.37
Lim2P56563 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lim2P56563 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lim2P56563 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lim2P56563 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lim2P56563 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lim2P56563 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lim2P56563 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lim2P56563 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lim2P56563 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lim2P56563 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lim2P56563 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lim2P56563 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lim2P56563 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lim2P56563 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lim2P56563 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lim2P56563 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lim2P56563 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.74□□□□□ -0.37
Lim2P56563 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.74□□□□□ -0.37
Lim2P56563 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lim2P56563 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lim2P56563 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lim2P56563 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Lim2P56563 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.74□□□□□ -0.37
Lim2P56563 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lim2P56563 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.74□□□□□ -0.37
Lim2P56563 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Lim2P56563 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.74□□□□□ -0.37
Lim2P56563 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lim2P56563 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lim2P56563 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lim2P56563 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lim2P56563 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lim2P56563 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lim2P56563 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lim2P56563 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lim2P56563 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lim2P56563 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.74□□□□□ -0.37
Lim2P56563 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.74□□□□□ -0.37
Lim2P56563 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lim2P56563 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lim2P56563 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Lim2P56563 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.74□□□□□ -0.37
Lim2P56563 Gm38002-201ENSMUST00000193255 180 ntBASIC12.74□□□□□ -0.37
Lim2P56563 Gm42693-201ENSMUST00000196779 631 ntBASIC12.74□□□□□ -0.37
Lim2P56563 Gm18054-201ENSMUST00000207539 555 ntBASIC12.74□□□□□ -0.37
Lim2P56563 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.74□□□□□ -0.37
Lim2P56563 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.74□□□□□ -0.37
Lim2P56563 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lim2P56563 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lim2P56563 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lim2P56563 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lim2P56563 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Lim2P56563 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Lim2P56563 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lim2P56563 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Lim2P56563 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lim2P56563 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lim2P56563 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lim2P56563 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lim2P56563 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lim2P56563 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lim2P56563 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lim2P56563 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.74□□□□□ -0.37
Lim2P56563 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lim2P56563 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lim2P56563 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lim2P56563 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Lim2P56563 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Lim2P56563 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.73□□□□□ -0.37
Lim2P56563 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Lim2P56563 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lim2P56563 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lim2P56563 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lim2P56563 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 94.3 ms